Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1603 ATGGCTCAGTACAGGCAATCGGGATCCGACAGGTACGCGCTCAGGGGACACGATCTGCACAACGGGAACGGGGCGTCCGATCACGTCTCCATTGGGATTCGCGCTCAGCACAAGCAGTCTCGAGCTCGGCGATCCAGTAAGGGCAGTAGGATTTCAGTCGGCGCAGTGGTTCTGATTCTCTCGCTCGTCCTCACCGTCACTGTTTTCGCTTATAATTACATCTCTGGAGACAGTGAAATAAATACTTATCATGCTCAGGATGATGACTCGAAGGATGAACTTGATTTTCTTACAAATGTAACTCGGATTGATAAGTCTAAAGTCCTCGAGTTTGGCCAGGGATCGGGAGTGCATGGTGGGGATTCAAGGTATTGGGAAAGGGATGATAGGAGAAGGGATGAAGATTACAATGAGGAAGCGTTGGAGCACAGTACCATGTCAACAAGGGATGGATCTATTGATAAGAGCCGTGTTGTAGTGAAAGGGAAGAATGACAACGAGAAAATATTTTTTGACAATTCTATTAAGGGTTCTGGTGGGCGAGGCAGTGGCTTGTACAATGAAGCTGGTCGTGATGAGCTGAAAATATATGAAGCGGAGTATGAGGCGTCTCTTAAGAATGTTGGGCAATCAATAAATGAGCATGGTGATAGAAATAAACTATTTGATGATGCAGGTTTTGGAATGCATAATGAGGAGATGGATGCTGATGATGAGTATGATGATGGTATTGATTCTCATGATGCACGAATGGTTGAAGATGATGATAATGGACATGAAAATGGGGATATTTCTAATGTTGCAAAATCTCATGATTCCTCTGACAGTATCTCTGCTGGAACCAAGGATGGGAATATTGTGGAAGAGGTTGATGAATCATCCTCTGTATCATCTTCTTTAAACAGTCAAAATTCCAGACATGTAAGTGTTGTTGATGGCCGGTCTACAAGAAAGTTCAGTTCTGAAAAGAGGCCAGAGTCAAAAAGAAAAAGACGGCACAAATTTTCTGGTTCCTCTTGTGAGATGAAGCTTTTAAACTCTACCGCACAGCTTGTAGAGCCTTTAGAAAGTCGCAAATTTGCAAGATTTTCTTTGCAGTATACAGCAGTAGAAGAGAAGCCGAATGGCCAAGAACATTGGGAGCCTAGATTTTCTGGGCATCAGAGTTTGCAGGAGAGAGAAGAATCATTTTTAGCGCATGACCAAAAAATAAACTGTGCCTTTGTGAAAAGTCCTAAAGGTTATCCGAGTACAGGATTTGACTTGGCAGAAGATGACGTGCGCTATATTAGCAGTTGCCATATTGCTGTAATTTCTTGCATTTTTGGAAATTCAGATCGCTTGAGATCTCCTGCAGGAAAAACGATCTCTCGTTTGTCAAGGAAAAATGTCTGTTTTGTTATGTTCATGGATGAAATTACTTTGCAAACACTTTCTTCAGAACGCCAAATGCCAGATAGAATGGGTTTTATTGGTTTATGGAAGACTGTGGTAGTGAAGAATTTGCCTTATACTGATATGCGGAGAGTCGGAAAAATACCCAAACTTCTGGCACATCGGCTTTTTCCTTCTGCAAGGTATTCAATTTGGTTGGATAGCAAATTGCGTCTCCAACTTGACCCTCTTCTCATCTTGGAATACTTCTTATGGAGAAAAGGTCACGAGTATGCCATTTCTAATCACTATGACCGGCACTGTGTATGGGAGGAGGTGGCACAAAATAAGAAACTGAACAAGTATAACCATAGTATTATAGATCAGCAGTTTGCATTCTACCAGGCTGATGGGCTGAAAAGATTCAATGCCTCAGATCCTAACAAGCTTCTTCCCAGCAATGTTCCTGAAGGATCTTTTATTGTGAGAGCACACACTCCAATGTCAAACTTGTTCTCCTGCCTTTGGTTCAATGAAGTTGATCGATTTACTCCTCGTGATCAACTAAGCTTTGCATACACATATCAAAAGTTGAGAAGGGTTAATCCAGGCAAACCATTTCATCTTAATATGTTCAAGGATTGTGAGAGAAGAGCCATAGCTAAGTTGTTCCGTCACAGGTCTGAGGAGAAGCGAAATATTCTTCAAGCAGCAGCAGAGTGA 2097 0.422 MAQYRQSGSDRYALRGHDLHNGNGASDHVSIGIRAQHKQSRARRSSKGSRISVGAVVLILSLVLTVTVFAYNYISGDSEINTYHAQDDDSKDELDFLTNVTRIDKSKVLEFGQGSGVHGGDSRYWERDDRRRDEDYNEEALEHSTMSTRDGSIDKSRVVVKGKNDNEKIFFDNSIKGSGGRGSGLYNEAGRDELKIYEAEYEASLKNVGQSINEHGDRNKLFDDAGFGMHNEEMDADDEYDDGIDSHDARMVEDDDNGHENGDISNVAKSHDSSDSISAGTKDGNIVEEVDESSSVSSSLNSQNSRHVSVVDGRSTRKFSSEKRPESKRKRRHKFSGSSCEMKLLNSTAQLVEPLESRKFARFSLQYTAVEEKPNGQEHWEPRFSGHQSLQEREESFLAHDQKINCAFVKSPKGYPSTGFDLAEDDVRYISSCHIAVISCIFGNSDRLRSPAGKTISRLSRKNVCFVMFMDEITLQTLSSERQMPDRMGFIGLWKTVVVKNLPYTDMRRVGKIPKLLAHRLFPSARYSIWLDSKLRLQLDPLLILEYFLWRKGHEYAISNHYDRHCVWEEVAQNKKLNKYNHSIIDQQFAFYQADGLKRFNASDPNKLLPSNVPEGSFIVRAHTPMSNLFSCLWFNEVDRFTPRDQLSFAYTYQKLRRVNPGKPFHLNMFKDCERRAIAKLFRHRSEEKRNILQAAAE* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1603 698 MobiDBLite consensus disorder prediction 243 266 - -
Vvi18g1603 698 MobiDBLite consensus disorder prediction 290 310 - -
Vvi18g1603 698 Pfam Protein of unknown function (DUF616) 365 684 IPR006852 -
Vvi18g1603 698 MobiDBLite consensus disorder prediction 224 338 - -
Vvi18g1603 698 PANTHER ALKALINE CERAMIDASE-RELATED 30 690 IPR006852 -
Vvi18g1603 698 MobiDBLite consensus disorder prediction 1 46 - -
Vvi18g1603 698 MobiDBLite consensus disorder prediction 267 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1603 Vvi-Chr18 20473931 20492034 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1603 - - vvi:100248770 1378.23