Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1597 ATGGCGGAGGTCGCGGTCTCGCGGAGCTGGGCCCAGGGCATGTCCTCTGACAACATCAAGGGCTTGGTCTTGGCCCTCTCCTCCAGTTTCTTCATTGGCGCCAGTTTCATTGTCAAGAAAAAGGGCTTGAAGAAAGCCGGCGCATCCGGCGTTAGGGCTGGTGTTGGAGGTTATTCTTACTTGTACGAGCCTCTTTGGTGGGCTGGAATGATAACAATGATTGTTGGGGAAATAGCTAATTTTGCTGCCTATGCATTCGCACCAGCTATTCTGGTCACTCCTCTTGGTGCTCTCAGTATCATTATCAGTGCTGTACTTGCATATATTATTTTGCGGGAGAAGCTGCACATTTTTGGAATTCTTGGTTGTGTTCTGTGTGTTGTGGGGTCAACAACAATTGTTTTACATGCTCCTCAAGAACGTGGGATTGAGTCTGTCAAAGAAGTGTGGGATCTTGCAACAGAGCCAGCTTTTCTTTTTTATGCTGCTTTGGTGATAGCAGCAGTATTCATACTTATAGTCCATTTTATTCCGCTGTATGGCCAGACACACATAATGGTCTACATCGGTGTTTGTTCACTTGTAGGCTCACTGTCGGTCATGAGTGTTAAAGCCCTTGGAATTGCATTGAAGTTGACATTCTCGGGAATGAATCAGTTGATATATCCCCAAACGTGGGCCTTTACTATTGTTGTAATTACTTGTGTGATTACTCAAATGAACTATTTAAACAAGGCTCTCGATACATTCAACACAGCTGTTGTATCACCTATATACTACGCGATGTTTACATCATTAACCATTTTGGCTAGTGTAATCATGTTTAAGGATTGGGATAGGCAAAATCCAACTCAAATTGTGACAGAGATGTGTGGATTTGTGACAATCCTTTCTGGGACTTTTCTTCTTCACAAAACAAAGGACATGGTTGAGGGTTCCTCACCGTCTTTTGCTGTGCGGCTCCCCAAGCACACAGATGAGGATGGATTTGAGCTTGAAGAAGATATCCCTTTCCAGTGTCAAGATTCTTTGTGA 1035 0.4396 MAEVAVSRSWAQGMSSDNIKGLVLALSSSFFIGASFIVKKKGLKKAGASGVRAGVGGYSYLYEPLWWAGMITMIVGEIANFAAYAFAPAILVTPLGALSIIISAVLAYIILREKLHIFGILGCVLCVVGSTTIVLHAPQERGIESVKEVWDLATEPAFLFYAALVIAAVFILIVHFIPLYGQTHIMVYIGVCSLVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWAFTIVVITCVITQMNYLNKALDTFNTAVVSPIYYAMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILSGTFLLHKTKDMVEGSSPSFAVRLPKHTDEDGFELEEDIPFQCQDSL* 345
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1597 344 PANTHER UNCHARACTERIZED 17 311 IPR008521 GO:0015095|GO:0015693|GO:0016020
Vvi18g1597 344 Pfam Magnesium transporter NIPA 17 309 IPR008521 GO:0015095|GO:0015693|GO:0016020
Vvi18g1597 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 64 136 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi18g1597 Vvi-Chr18 20357022 20367403 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1597 K22733 - atr:18441060 553.518