Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1596 ATGGGTGTGATTAATATCTACGATATTTCCTCTCTTTGTGTGGTCAAACACAATACTGATATTCACTTATTGGAACCCCGAGCACCCATTTGTTCATTTGAGGGAAGGCGCAAGGGGGTTACTTGTATGACCTCCGCCATGCCTGTAAAACAGGCCAGCGAGGTCCAGGAACGCCTAACTGGAGACTCATTCATCCGACCCCATCTCAAGAATTTGTCACCTTATCAACCCATTTTGCCTTTTGAGGTTTTGTCATCACGTCTTGGCAGGAAGCCTGAAGATATTGTCAAGCTAGATGCAAATGAAAACCCTTACGGTCCACCCCCAGAGGTATTTGAAGCTTTGGGGTCATTGAAATTCCCATATGTTTATCCTGACCCTGAAAGCCGTCGATTACGAGGTGCACTTGCAGAAGATTCAGGCATTGAGTCTGATTATATTCTTGCCGGATGTGGTGCAGATGAGCTCATTGATTTGATTATGCGATGTGTACTGGATCCTGGTGACAAGATTGTGGATTGTCCGCCAACTTTCACAATGTATGAATTTGATGCTGCTGTTAATGGGGCACTTGTTCTCAAAGTACCGAGGAATTCAGACTTCAGTCTGAATTTAGAGGCCATTGCTGATGTTGTTGAGAAGGAGAAACCAAAATGCATATTCCTAACTTCTCCCAACAACCCAGATGGAAGTATTATCAATGATGAAATTCTCTTGAAGATCCTTGAACTGCCTATTTTGGTCGTGCTGGATGAAGCATACATTGAATTTTCAGGAATTAAGTCTAGGATGGGATGGGTGAAGAAGTTTGAGAATTTAATTGTCCTGAGGACATTTAGCAAAAGAGCTGGATTAGCTGGACTCCGTGTGGGGTATGGAGCATTTCCTTTGAGCATTATTGAGTATCTTTGGAGAGCAAAGCAACCATATAATGTTTCTGTTGCTGCTGAAGTTTCTGCATGTGCAGCATTGCAGAATCCCGCCTATTTGGAGAAGGTGAAAGAAGCTTTGGTACAAGAGCGGGGTAGGCTGTATAAGCTTCTGAAAGAAGTGCCATTTCTCAACCCATTTCCAAGCTATTCTAATTTCATTCTTTGTGAAGTTACATCTGGTATGGATGCTAAGAAGCTAAAGGATGATCTTGCAAAAAAGGGCGTGATGATCCGTCACTACAGTAACAAAGAATTGAAGGGATATGTTCGTGTCTCTGTTGGGAAGCCTGAACACACAGACGCCTTGATGGCGTGCCTCAATTCCCTATCTTGA 1266 0.4321 MGVINIYDISSLCVVKHNTDIHLLEPRAPICSFEGRRKGVTCMTSAMPVKQASEVQERLTGDSFIRPHLKNLSPYQPILPFEVLSSRLGRKPEDIVKLDANENPYGPPPEVFEALGSLKFPYVYPDPESRRLRGALAEDSGIESDYILAGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGALVLKVPRNSDFSLNLEAIADVVEKEKPKCIFLTSPNNPDGSIINDEILLKILELPILVVLDEAYIEFSGIKSRMGWVKKFENLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVSACAALQNPAYLEKVKEALVQERGRLYKLLKEVPFLNPFPSYSNFILCEVTSGMDAKKLKDDLAKKGVMIRHYSNKELKGYVRVSVGKPEHTDALMACLNSLS* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1596 421 PANTHER HISTIDINOL-PHOSPHATE AMINOTRANSFERASE-RELATED 46 419 - -
Vvi18g1596 421 SUPERFAMILY PLP-dependent transferases 74 418 IPR015424 -
Vvi18g1596 421 CDD AAT_like 96 410 - -
Vvi18g1596 421 Gene3D - 124 325 IPR015421 GO:0003824
Vvi18g1596 421 Pfam Aminotransferase class I and II 94 413 IPR004839 GO:0009058|GO:0030170
Vvi18g1596 421 Gene3D Aspartate Aminotransferase, domain 1 93 414 IPR015422 GO:0003824
Vvi18g1596 421 Hamap Histidinol-phosphate aminotransferase [hisC]. 64 421 IPR005861 GO:0000105|GO:0004400
Vvi18g1596 421 NCBIfam histidinol-phosphate transaminase 66 419 IPR005861 GO:0000105|GO:0004400
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1596 Vvi-Chr18 20331603 20345851 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1596 K00817 - vvi:100255576 822.387