Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1591 ATGGGCTGGATGTCACTGAATCTCCTATATTGCAGGCAGATATTTGGAAGGGAAGTAGCAATAAAATCATTGACTTCAAGAAATCTTAAAGGATTCTTGACTAACATTTTGGCTTTTGAGGATGCTACAAATGCAAAAAGGCCACTGATTGCTGTATCTGCACTTTCATGTGGAGTAGCCTCGTGGTTGACTTCTGCACAAGTTGCACACTCAAGTGAAGATGTCAAAATGAATGTAGTCTATGAGGTTGGGGAGTTGTTTGAATTGGGGATTCAGCTTTCTTACCTTCTTTTACTGTTAGGTTTGATTGGAGTTGGAACCTTTTTTGTGATTCGTCAAGTCCTTGTTCGTAGAGAACTTGACCTTTCTGCTAAAGAATTGCAAGAGCAAGTAAGAAGTGGTGATGCCAGTGCAACTGAACTGTTTGAACTTGGAGCAGTGATGTTGCGGAGGAAATTTTATCCAGCTGCTACTAAATTCTTGCTTCAGGCAATTGAGAAATGGGATGGAGATGATCAAGATCTTGCCCAGGTTTACAACGCACTTGGTGTCAGTTATGTTCGTGATGGGAAGCTTGAAAAGGGAATCACTCAGTTTGAGAATGCCGTGAAACTTCAACCAGGCTATGTCACAGCCTGGAACAACCTTGGTGATGCTTATGAGAAGAAGAAAGACTTAAAGTCTGCTCTTAAGGCATTTGAAGAAGTGCTTCTTTTCGATCCTAACAATAAGGTGGCACGACCTCGGAGAGATGCGTTGAAGGATCGTGTTCAATTGTACAAAGGAGTAGTTCCCACTCAACCAAAGGAGAGATGA 816 0.4191 MGWMSLNLLYCRQIFGREVAIKSLTSRNLKGFLTNILAFEDATNAKRPLIAVSALSCGVASWLTSAQVAHSSEDVKMNVVYEVGELFELGIQLSYLLLLLGLIGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAATKFLLQAIEKWDGDDQDLAQVYNALGVSYVRDGKLEKGITQFENAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVQLYKGVVPTQPKER* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1591 271 Pfam Tetratricopeptide repeat 181 240 - -
Vvi18g1591 271 Gene3D Tetratricopeptide repeat domain 122 258 IPR011990 GO:0005515
Vvi18g1591 271 ProSiteProfiles TPR repeat region circular profile. 210 243 - -
Vvi18g1591 271 SUPERFAMILY TPR-like 135 247 IPR011990 GO:0005515
Vvi18g1591 271 ProSiteProfiles TPR repeat profile. 176 209 IPR019734 GO:0005515
Vvi18g1591 271 ProSiteProfiles TPR repeat region circular profile. 176 207 - -
Vvi18g1591 271 SMART tpr_5 210 243 IPR019734 GO:0005515
Vvi18g1591 271 SMART tpr_5 176 209 IPR019734 GO:0005515
Vvi18g1591 271 ProSiteProfiles TPR repeat profile. 210 243 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1591 - - vvi:100243534 480.33