Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1584 ATGGTGACCAAAATATTCCTACAAAACCTAAATTATTGGGAACCCAGAGTGTACCCTCCACTGCCCTTTCTTTATCATGTTCGAATCTTCTCTCTGTGGTCAATGAAGAAGGACCCAGATCTTGAATCATCTCTCAGTCGAAACCGTCGATGGATTGTCAATAATCAGATCAAGAATATAATCCTTCGATGCCCTGAACAAGTAGCAGCAGTTAAGTTTCTCCAGAAAAAGTTCAAAACTCTCGATCTTCAAGGCAAAGCTCTCAATTGGCTGAAAAAATACCCCTGCTGCTTCAATGTCTATCTTGAAGGTGATGAGTACTATTGTCAACTCACAAAGCGAATGATGTCTTTGGTAGAGGAGGAAGAATCTGTGAAGGATATGCAGGAACCAGTGCTTGTGGAGCGATTAACAAAGTTGTTGATGATGAGCATAAATCATAGACTCAATGTCATGAAACTCAATGAGTTAAAGCGAAGTTTTGGATTTCCAGATGATTATTTGATTAGAATTGTGCCAAAGCACCCAGAAATGTTTCGAATTGTTAATTACAGTGGGAGACGGAGTGCAATGGAGATTGAACTCTTATCCTGGAATCCTGATTTAGGCATTTCTGTAATTGAAAGCTTAGCTCACAGCCAGGGTTCTGATCCACGGTTTTCATGTACACTGCCTTCAACTTGGGTGAAATCATGGGAGAGATTTTGTGAATTTAATGCAACTCCATATATTTCACCTTATTTGGATGCCAGTCATTTAGTGGAAGGATCGAAGGAGATGGAGAAGAGGATAGTAGGTTTGGTGCATGAGTTGCTGTCATTAACCTTGTGGAAGAAATTGTCGATTGTGAAGCTAGGTCATTTTAGAAGAGAGTTTGGTTTACCAGAGAAATTGAATGTTTTGCTACTCAAACATCCTGGAATATTTTATGTTTCAAATAGGTACCAGATTTACACAGTTCTTCTTAGAGAAGGATATAATGGGTCAGAACTGATTGATAAGGATCCGCTTGTTGTTGTGAAGGAGAAATTTGGTGAATTGATGCAGGAGGGGCTACATGAATATAATCGGAGGCACCATTTAATGAATTTAGAAAAGAAGAAGAAGAAAGGCATGGTATTGGAAAGTTCACCAAAAATGAGGGACAAAAGCTCTGAAATGTCTGAACAAGATGATCATGAGAGTAATCTAGGAGGTTTATTGGACCCTGAAGAAAGAAAGCGGTTTTATAAAGTTCTGTTTGATGATGCTGCCTCCTAA 1260 0.3905 MVTKIFLQNLNYWEPRVYPPLPFLYHVRIFSLWSMKKDPDLESSLSRNRRWIVNNQIKNIILRCPEQVAAVKFLQKKFKTLDLQGKALNWLKKYPCCFNVYLEGDEYYCQLTKRMMSLVEEEESVKDMQEPVLVERLTKLLMMSINHRLNVMKLNELKRSFGFPDDYLIRIVPKHPEMFRIVNYSGRRSAMEIELLSWNPDLGISVIESLAHSQGSDPRFSCTLPSTWVKSWERFCEFNATPYISPYLDASHLVEGSKEMEKRIVGLVHELLSLTLWKKLSIVKLGHFRREFGLPEKLNVLLLKHPGIFYVSNRYQIYTVLLREGYNGSELIDKDPLVVVKEKFGELMQEGLHEYNRRHHLMNLEKKKKKGMVLESSPKMRDKSSEMSEQDDHESNLGGLLDPEERKRFYKVLFDDAAS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1584 419 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 31 384 IPR045040 GO:0003723
Vvi18g1584 419 MobiDBLite consensus disorder prediction 370 402 - -
Vvi18g1584 419 Pfam Plant organelle RNA recognition domain 36 351 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1584 Vvi-Chr18 20143132 20144391 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1584 - - vvi:100253756 855.129