Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1583 ATGGCGGATCAAGAGGAGGAGGACCTGCGGATGGCGCTGCGGATGAGTATGCAGCAGTGGCCGCCGGAGCCGAAGCGGAGCAAGCCGAGGGAGAGCGGGGGGGCTCCCACCGGGTCGCCGGATGATTCGCCGGAGGCAAAGAGTAGGCGGTTGCAGAGGGAGCTTATGGCTGCCGCGGCGGAGAAGCGACTGATGATGTCTGGGAAGCCCGCGTCTCCGGCGCGGAGAAATGTGGCATTTCCAAAGGAAGAAAAGGATGGGGTTGCCGGAGGTGCGGGAGGTGATGGGCGGAAGGAGGTGAGTTGTGGAATGGAGCTATCCGATGCCGATGTAAATCAGTTGTTCTCTATGGTCTTTGGTAATGATGTTTCGAAGGGGATTCTCGCGCAGTGGTGTAATCAGGGAATTAGGTTTAGCCCTGATCCAGAAACATTTATGGGCCTAGTACAACATGAAGGCGGGCCATGTGGTGTCTTAGCTGCCATACAAGCCTTTGTTCTGAAGTACCTTATTTTCTTTCCGGATGATTTAGGAAAAGTTGAACCAAACATGCCAGAAAATGTAGATTCAAGGAGATTTTCTAAAAGTGAATCTGTTACATCGAATATGTTTTCTTCTCTTACCGAAGATGGAAAAGCAAGAGCCTTGGTCAGGAGCATGGGTGAGATACTGTTTTTATGTGGAAGTAATAAAAGGGCTGTGATTGCAACCTTGAGCATTCTCGTGCATGATGCTGAGGGGTCTGACAGTCTAAAGGATGATATCATGACAAAAGCACTTGAAGGTGTTTCTATAGAATCAGCTTCTGATTTGCAGACAATTTTAAGAGTTAATACCTATACTTCAATTGCAAATGCATACAAGAGGCTCGAAGCGATGATTCCTGTTTTCCAAAGTCGTATGGGGGCACTGCTATTCCTTATTTCTGCTTTACTCTCTCGAGGATTGGACTCCATTCAAGCTGACAGAGACGATCCGAACCCACCTCTAGTGACTGCTCCATTTGGCCATGCCTCACAGGAAATTGTAAACTTACTGCTATGCGGGCAGGCTGTCCCTAATGTGTTTGATGGAAGGATGGATTTAGGTGGGGGCATGTCTTTGAAGGGAATATCCACATGTGTGGAAGTTGGATTCCTTACTTTGCTAGAATCCCTGAATTTCTGTAAGGTTGGGCAGTTTCTGAAATGCCCAAAATGGCCAATATGGGTTGTTGGGAGTGAGTCTCATTATACAGTCCTATTTGCTCTTGATACCACTGTTCAAGATGAGAATGAACTGGAAGAAAGAGAGTCACAGATCAGGAAGGCATTTGATGCGCAAGATCAGAGTGGAGGAGGTGGCTTCATCAGTGTGGAAGGGTTCCATCAAGTCCTCAGAGAAACAGGCATTGACCTTCCACCTGAGAAGCTAGATCACCTCTGTGGGGCTGGGTTTATTGTATGGAGTGAGTTCTGGCAGGTTCTTCTGGATTTAGACAAGAGATTTGGAGGCTTAAAAGATCCTACTGGATCAATGGGTAAGAAGGTCTTTGATCTTTACCATTTTAATGGGATTGCAAAATCGGTCTTGAATGGGAGTCCAGCAGCTTCAGGAAGTGAGATGCCAATTCAAAGACCTAGACTTACAAAATTGAGGGTTTCAGTTCCCCCAAGATGGACTCCTGAGGAGTTTATGGCAGATGTTGTATTGCCCTCTGCTTCAGGTGGGAATGACCCAAGTGCAAAAGAAACGGTTATTGAAGTGGCTAAACCAGAGCCTGCTCAACATGCACCATTGGTGGACTGCATTAGAACGCGCTGGCCAAGGGCTGTTTGCAACTGGGTGGGGGATCCCCCTAGCATAGTCTGA 1851 0.4776 MADQEEEDLRMALRMSMQQWPPEPKRSKPRESGGAPTGSPDDSPEAKSRRLQRELMAAAAEKRLMMSGKPASPARRNVAFPKEEKDGVAGGAGGDGRKEVSCGMELSDADVNQLFSMVFGNDVSKGILAQWCNQGIRFSPDPETFMGLVQHEGGPCGVLAAIQAFVLKYLIFFPDDLGKVEPNMPENVDSRRFSKSESVTSNMFSSLTEDGKARALVRSMGEILFLCGSNKRAVIATLSILVHDAEGSDSLKDDIMTKALEGVSIESASDLQTILRVNTYTSIANAYKRLEAMIPVFQSRMGALLFLISALLSRGLDSIQADRDDPNPPLVTAPFGHASQEIVNLLLCGQAVPNVFDGRMDLGGGMSLKGISTCVEVGFLTLLESLNFCKVGQFLKCPKWPIWVVGSESHYTVLFALDTTVQDENELEERESQIRKAFDAQDQSGGGGFISVEGFHQVLRETGIDLPPEKLDHLCGAGFIVWSEFWQVLLDLDKRFGGLKDPTGSMGKKVFDLYHFNGIAKSVLNGSPAASGSEMPIQRPRLTKLRVSVPPRWTPEEFMADVVLPSASGGNDPSAKETVIEVAKPEPAQHAPLVDCIRTRWPRAVCNWVGDPPSIV* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1583 616 MobiDBLite consensus disorder prediction 1 52 - -
Vvi18g1583 616 Pfam Deubiquitinating enzyme MINDY-3/4, conserved domain 117 428 IPR025257 -
Vvi18g1583 616 Gene3D - 410 495 - -
Vvi18g1583 616 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 4 18 IPR003903 -
Vvi18g1583 616 PANTHER UNCHARACTERIZED 3 615 IPR039785 GO:0004843|GO:0071108|GO:1990380
Vvi18g1583 616 MobiDBLite consensus disorder prediction 67 96 - -
Vvi18g1583 616 SUPERFAMILY EF-hand 428 490 IPR011992 -
Vvi18g1583 616 SMART DUF4205_3 115 491 IPR025257 -
Vvi18g1583 616 MobiDBLite consensus disorder prediction 78 92 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1583 K22647 - vvi:100258904 1220.68