Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1581 ATGGAATTGAAAATTGATGAGATTGAGGATGCTAAGGATACTCTACGATACATGATTAAGAATCGGTTTCCAAGTGGAAACTACCCTGCAAGTGAAGAAGATAGAAACCGGGATGTTCTTGTGCACTGGTGTCATGGGGCTCCTGGAGTTGCCCTCACACTTGCCAAAGCAGCTGAGGTTTTCGGAGATGATGAATTTCTGGAAGCAGCTATTAATGCAGCAGAGGTAGTTTAG 234 0.4402 MELKIDEIEDAKDTLRYMIKNRFPSGNYPASEEDRNRDVLVHWCHGAPGVALTLAKAAEVFGDDEFLEAAINAAEVV* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1581 77 Gene3D - 2 77 IPR012341 GO:0005975
Vvi18g1581 77 Pfam Lanthionine synthetase C-like protein 5 77 IPR007822 GO:0031179
Vvi18g1581 77 SUPERFAMILY LanC-like 8 77 - -
Vvi18g1581 77 PANTHER LANC-LIKE PROTEIN 5 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1581 Vvi-Chr18 20030815 20031048 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1581 - - vvi:100256888 147.902