Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1564 ATGGTTGCTGTCGATTTTACTGCTTCAAATGGAAATCCTCGAACTCCAGATTCTTTGCACTACATTGATCCTTCTAGCCGGTTCAATGCTTACCAACATGCTATAATGGACGTCGGAGAGGTCATACAATTTTATGATTTTGATAGGTGCTTTCCTGCATGGGGATTTAGGGGAAGGATAATGGATGGTACCATATCACATTGTTTTAACATGAATGGAAGTGCAAGTGGTGTTGAGGTTGAAAGGGTTCAAGGGATCATGGCTACCTATGCAAGTGCACTGAACCATGTTGCTCTGACGGGACTGACCTTATTTGGACAAGTGATCAACAATGTAGTTGAAATTGCTGGCCAGTCCCTCTACTATAATAGCTGTAAATATTTTGTTTTGCTTATCATAACGGATGGAGTGCTTACAGATCTCCAAGACACAAAAGATGCTTTGGTCAGGGCATCTGATTTGCCTTTATCGATTCTGATAGTTGGAATGGGAGGAGCACATTTTTAA 507 0.4122 MVAVDFTASNGNPRTPDSLHYIDPSSRFNAYQHAIMDVGEVIQFYDFDRCFPAWGFRGRIMDGTISHCFNMNGSASGVEVERVQGIMATYASALNHVALTGLTLFGQVINNVVEIAGQSLYYNSCKYFVLLIITDGVLTDLQDTKDALVRASDLPLSILIVGMGGAHF* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1564 168 PANTHER COPINE 1 168 IPR045052 GO:0005544
Vvi18g1564 168 Pfam Copine 18 168 IPR010734 -
Vvi18g1564 168 SUPERFAMILY vWA-like 2 165 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1564 Vvi-Chr18 19750714 19751220 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1564 - - vvi:100247065 296.975