Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1562 ATGGAGGTTGAATTGGAAATCAACATCACCCCCACCAACCTTCCTCCCATCACCAAGGACCCTGTTTTCTTGTCTACAGAAGCTGACACCCTCTTCATCCTCATTGCCAATCTCAAAGGATATCAGAAGGAGAAACTCAAGATCGATAAAAACGAAGATGGGACTCAGATTGCAGTCAGTGGGGAGAAGGTAGGAAGTACTAGTTTGCAACCGTTCCGGAGGATGGCCTTCAGGGCAACGCCTCAGGTTACAAAATTCAGAAAGGTCTTTTGGATTCCAGATGGGGTTGTTTTGGATCAAATCAAGGCCAAGTTCAATGAAAAGGAATCGGTTTTGTGGATTTTCATGCCTAAATCGGTTACAGAAGTTAGTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGAGGAAGTGAAAGAAGAGGAGATTGGTAGGAGGAGTGATAGAAGGACTCCGCCTGTACTTGTCAAGGTTCCTGAAAGAGAGATTCCTGGAAAGAATGAGCAGGAAATGAAAGAAGGGAAGAAAGACGTGCCCAAACATGAACCAGAAGAAGTAAAAGAAGCTATCCCCAAGGCAGAAGTTGCGGAAATAGAAAATCCTAGAAAGAGTGAGCAGGAAATGAAAGAAGGGAAGAAAGATGTGAAGGCAACTGAGGTTGTGGGAGGACTGCCCCAACATGAACCAGAACGAGAAAAAGAAGCTATCCCCCAAAAAGAAGCTGCTGAAAGAGAGAATCATAGAAAGAACGAGCAGGAAATGAAAGAAGAGAGGAAAGATGCGAAGGCAACTGATGAGGACGTGGGAAGATTGCACCATCATGAACCAGAACAAGTAAAGGAACCTATCTCCCAAAAAGAAGCCGATGAAAGAGAGAATCCTACAAAGAATGAGCAGGAAATGGAAGAAAGGAGGGAAGAAGTGAAGGCAACTGATGAGGATGTGGGAAGATTACCCCAACATGAACCAGAACAAGTAAAAGAAGCTATGCTCAAGAAAGAAGCAGCTGATATTACAATAACACGTCCAGAGGAAGAGAATACTCGGTCGAATAAAAGAGAGGTGCCATCAAAAGAAGAAACTCCAGCCAAAGAGGTCTCCGATTTAGAAGCAAAAAGAACAGCAGCAGAGGAGAAATCAGAGGAGTGCCAACACGGTCCAGAGGTAACTGAATCAACAAAAGTTGAAGCAGTTCAAGTAACTCAACAAGCTCATGTCGAAGAAGATAATGCCCCTGAGGAAAATGGTGAAGTTGAAACTCATCTGTCGCAACAAGAGTTGAATACAGAAATTCAAGAAGTGTCCCAGCTCGAATCTGACCAAGAATCTGATTCAACTGAATCACTGAAGCCTGATCATCCTGAAGAAGTTCAAGGAATGGGAAATGAAATTCAAGCAGAAATTGACCCAGTAATCCTTCCTGAAGAAAAAGTAGATAACAGAAAGGGCTCATTGGCTCCTCCCAAAAAGTTTAGGCTATGTAGTCCATGTTTCTTTGCAGGATCTGCCATCCTTGTATCAATTGTAGTGCTTGTCATTCACTTCAGTCGACCTAAAAGAAGATGA 1563 0.437 MEVELEINITPTNLPPITKDPVFLSTEADTLFILIANLKGYQKEKLKIDKNEDGTQIAVSGEKVGSTSLQPFRRMAFRATPQVTKFRKVFWIPDGVVLDQIKAKFNEKESVLWIFMPKSVTEVSGVGVGVGVGVEEVKEEEIGRRSDRRTPPVLVKVPEREIPGKNEQEMKEGKKDVPKHEPEEVKEAIPKAEVAEIENPRKSEQEMKEGKKDVKATEVVGGLPQHEPEREKEAIPQKEAAERENHRKNEQEMKEERKDAKATDEDVGRLHHHEPEQVKEPISQKEADERENPTKNEQEMEERREEVKATDEDVGRLPQHEPEQVKEAMLKKEAADITITRPEEENTRSNKREVPSKEETPAKEVSDLEAKRTAAEEKSEECQHGPEVTESTKVEAVQVTQQAHVEEDNAPEENGEVETHLSQQELNTEIQEVSQLESDQESDSTESLKPDHPEEVQGMGNEIQAEIDPVILPEEKVDNRKGSLAPPKKFRLCSPCFFAGSAILVSIVVLVIHFSRPKRR* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1562 520 Gene3D - 20 124 IPR008978 -
Vvi18g1562 520 MobiDBLite consensus disorder prediction 469 485 - -
Vvi18g1562 520 MobiDBLite consensus disorder prediction 159 485 - -
Vvi18g1562 520 MobiDBLite consensus disorder prediction 224 388 - -
Vvi18g1562 520 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 13 133 IPR002068 -
Vvi18g1562 520 MobiDBLite consensus disorder prediction 159 216 - -
Vvi18g1562 520 SUPERFAMILY HSP20-like chaperones 25 120 IPR008978 -
Vvi18g1562 520 MobiDBLite consensus disorder prediction 420 441 - -
Vvi18g1562 520 CDD ACD_sHsps_p23-like 26 118 - -
Vvi18g1562 520 Coils Coil 238 266 - -
Vvi18g1562 520 MobiDBLite consensus disorder prediction 442 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1562 Vvi-Chr18 19711564 19713217 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1562 - - vvi:104882692 989.178