Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1554 ATGGGGACCAATGGGATTGATGGGATTGAGAGCTCGCTCAAAAGTTCAGACGAAGTAGGTGTGTCTAACGGGTCAGCCGTTGTGGAAAACAAGTATTCCGAGGGAGGTCTTGGGGCAGAGGATGTGAAGGCGGGGTCGGGCCGGAGGACATCCGTTTTGGAGATTTCGCAACTGAAAGATTTGAATGATAGTTTTTCACTAAGGAGGGGCTTGGATCATTGCATCACTGCTCCTGCTGGCACACACAAAAATTTGCTAATTGACGGCAATGAGATTGGATTATTTAGATCTATGACTGAGAAGAAGGAGGGTCCACGGCATGACTTAAAATTAGATAGACTGTCAGAACGTGCAAAGCAAAAATTAATAGCAAACCTAGTGAAGATCCAAAGTGATGGGACGGTGGAGGTTGATTTAGATAATAGTGCACCTGTGGCTTCAGAGTTGTTAGAGCTCCGTGCTATTGAAGGGATATCATCCATTCATATTGATGAATCTTATTTTGAATTCAATAAATCAGTTCCAAAGTTGAAAATTGTGATGCTTGTGGTTGGAACAAGAGGAGATGTACAACCATTTCTGGCAGTGGCAAAGAGACTTCAGGAATTTGGTCATTATGTTAGGTTGGCAACTCATAGTAACTTCTGTACTTTTGTAAAGTCAGCTGGTGTGGACTTCTATCCTTTGGGTGGTGATCCTCGGGTTTTGGCAGGATATATGGCCAGAAATAAAGGTTTCATTCCAGCTGGACCAGGAGAACTATCTGTACAAAGAAAGCAGCTAAAGGCCATTATTGAATCTCTTCTTCCAGCATGCATAGAACCAGATATAGAAACTGGTGTGCCTTTTAGAGCTCAGGCAATTATTGCAAACCCTCCTGCTTATGGACATGCACATGTTGCTGAAGCTCTTGGTATACCCCTCCATATCTTCTTCACAATGCCTTGGACGCCAACATATGAATTTTCTCATCCATTGGCTCGTGTACCTCGAAGTGCTGGTTATTGGCTTTCATATATAGTTGTGGATTTGCTGATATGGTGGGGCATAAGAGGATATATTAATGACTTCAGGAAAAAGAAGTTGAAGCTTCCTCCTATTGCATACTTCAGTACTTACCATGGGTCAATATCTCATCTGCCAACAGGCTACATGTGGAGTCCCCATGTTGTGTCAAAACCAAAAGATTGGGGCTCCTTAGTTGATGTTGTTGGCTATTGTTTCTTAAACCTTGGGTCCAGGTATCAACCTCAAGAAGAGTTTGTTCAGTGGATCCAAAAAGGAGACAAACCTATATATATAGGTTTTGGGAGCATGCCTCTTGAAGATCCCAAGAAAACTACGGATATCATATTAAAGGCATTGAAAGATACAGGTCAGAGGGGAGTAATTGACCGAGGTTGGGGAGGCCTTGGAATTCTTCCGGAAGTTCCTGATTATGTTTTTCTTCTGGAGGAATGTCCCCATGATTGGCTGTTTCCTCGGTGTTCTGCTGTGGTTCATCATGGTGGTGCTGGAACCACAGCTACAGGACTCAAGGCTGGGTGTCCAACAACCATAGTGCCGTTCTTTGGAGATCAGTTCTTCTGGGGTGATAGAATTCATCAAAGAGGACTTGGGCCTGCACCTATACCTATATCGCAGCTCAGTGTTGAGACCCTTACTGATGCCATACGATTCATGCTCCAGCCAGAGGTTAAATCTCAAGCAATGGAATTAGCAAAATTGATAGAGAATGAAGATGGGGTAGCAGCTGCAGTTGATGCATTTCATCGGCATTTACCTCCACATCTACCACTGCCTACTGCATCTTCATCAGAAGACACAGATCCCAACCCTCTACAGTGGTTCTTTTCTCTGATTGAGAAATGGTGTTGCCTTCCCTGTGGTTCCTAG 1896 0.4383 MGTNGIDGIESSLKSSDEVGVSNGSAVVENKYSEGGLGAEDVKAGSGRRTSVLEISQLKDLNDSFSLRRGLDHCITAPAGTHKNLLIDGNEIGLFRSMTEKKEGPRHDLKLDRLSERAKQKLIANLVKIQSDGTVEVDLDNSAPVASELLELRAIEGISSIHIDESYFEFNKSVPKLKIVMLVVGTRGDVQPFLAVAKRLQEFGHYVRLATHSNFCTFVKSAGVDFYPLGGDPRVLAGYMARNKGFIPAGPGELSVQRKQLKAIIESLLPACIEPDIETGVPFRAQAIIANPPAYGHAHVAEALGIPLHIFFTMPWTPTYEFSHPLARVPRSAGYWLSYIVVDLLIWWGIRGYINDFRKKKLKLPPIAYFSTYHGSISHLPTGYMWSPHVVSKPKDWGSLVDVVGYCFLNLGSRYQPQEEFVQWIQKGDKPIYIGFGSMPLEDPKKTTDIILKALKDTGQRGVIDRGWGGLGILPEVPDYVFLLEECPHDWLFPRCSAVVHHGGAGTTATGLKAGCPTTIVPFFGDQFFWGDRIHQRGLGPAPIPISQLSVETLTDAIRFMLQPEVKSQAMELAKLIENEDGVAAAVDAFHRHLPPHLPLPTASSSEDTDPNPLQWFFSLIEKWCCLPCGS* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1554 631 CDD GT1_Gtf-like 177 593 IPR002213 GO:0008194
Vvi18g1554 631 Pfam Glycosyltransferase family 28 N-terminal domain 179 321 IPR004276 GO:0005975|GO:0016758|GO:0030259
Vvi18g1554 631 MobiDBLite consensus disorder prediction 1 20 - -
Vvi18g1554 631 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 420 576 IPR002213 GO:0008194
Vvi18g1554 631 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 178 594 - -
Vvi18g1554 631 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 92 623 - -
Vvi18g1554 631 Gene3D Glycogen Phosphorylase B; 408 577 - -
Vvi18g1554 631 Gene3D Glycogen Phosphorylase B; 178 582 - -
Vvi18g1554 631 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 179 410 - -
Vvi18g1554 631 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 411 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1554 Vvi-Chr18 19629061 19648973 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1554 200 630 Glycosyltransferase AT1G43620 80.230 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1554 K05841 - vvi:100250270 1268.06