Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1551 ATGAAGTGGCGACCTCCGGTGACTGCGAGGGCGAGGGCCGGGGGACTAGGTGTGGCCGCCATAGCCTACGTGGCTGTTGATTACCTCCGGTACCTGGCTCCGGCATGGCACTCCTGGCTAATGCCTGCTCTCTGGTCAGTGCTCGCTCTAGTAGCCGTCGCTCGCGTCCCCTTCTACAAGCACTGGTCCATGGAGTTCCGTTCTGTTTTGCCCTTTGTTGCTTCGATGATCTTCATGCTCTCCACCTGTCTCTTTGAAGTTCTCTCTGTTCGCTCCGTGACCGCCGTTCTCGGTCTCGATTGGCACAGTGATACTCCTCCCCTTCCTGACACTGGCCAGTGGTTTCTCCTGGCGTTGAATGAGAAACTTCCTCCTACGGTGGTTGAGATACTTAGAGCGCATATTATTGGATTGCACCATTTTTTGATGCTGTTCATGATGCTGGCTTTCTCAGTATTATTCGACTCTGTAAAAGCTCCTGGCCTTGGGCTAGGTGCTAGGTACATGTTCACCATGGCAATAGGGCGATTTCTTCGGGCCATAACTTTTGTATCTACAATTCTGCCATCGGCCCGGCCTTGGTGTGCTTTTGCCCGCTTCAGAGTTCCTGCACACCCACATCATTGGGCTCAAAAATATTATGTCCCTTATGCTTCGGATCCAGCTGCTATTCGTCAAGTAATAGAACGTGATATAGCCTATGCTGATGTTGGAAATTACCTTGGTGACTTTCGTCCTGATTGGGGTTCAATGAGCTTCCTTATAGACTTCCTGCGACCAACTACTACTGACGGGTCATGGTACAATCTGCTAAAGAAAGCTGGAGGAGGATGCAATGACCTCATATACAGTGGCCACATTCTTGTAGCAGTACTGACTGCTATGGCTTGGACGGAAGCTTATGGAGGTTTCAGCTCGGCTGTCATATGGCTGTTTGTATTGCACAGTGCCCAAAGGGAAATACGGGAACGCCACCATTACACTGTGGACTGTGTTGTGGCCATCTATGTGGGCATTCTTCTGTGGAAGATGACGGGTTTTATCTGGTCAGCCAAGGATGCATCCCGAAGTAAAAGGCTGAGTAGGCTTGATAAAATTCATGGTAGACTAACCCAAGCTGCAAAAGACTCAAATATGGATGAGGTGAGGGAGCTTCTAAAAGAGGTCGAGATGGGCAGCCCGGCAAGCCATAGTAGTGGCAGGGTGAGGAGCAGGGCGATGTGGGTATTTGCCTGTGCAACCATATTCTCTGCACTTACAGTAGTTTTTCTGGCACTCACATTGACTAGTGATGGATGA 1299 0.5012 MKWRPPVTARARAGGLGVAAIAYVAVDYLRYLAPAWHSWLMPALWSVLALVAVARVPFYKHWSMEFRSVLPFVASMIFMLSTCLFEVLSVRSVTAVLGLDWHSDTPPLPDTGQWFLLALNEKLPPTVVEILRAHIIGLHHFLMLFMMLAFSVLFDSVKAPGLGLGARYMFTMAIGRFLRAITFVSTILPSARPWCAFARFRVPAHPHHWAQKYYVPYASDPAAIRQVIERDIAYADVGNYLGDFRPDWGSMSFLIDFLRPTTTDGSWYNLLKKAGGGCNDLIYSGHILVAVLTAMAWTEAYGGFSSAVIWLFVLHSAQREIRERHHYTVDCVVAIYVGILLWKMTGFIWSAKDASRSKRLSRLDKIHGRLTQAAKDSNMDEVRELLKEVEMGSPASHSSGRVRSRAMWVFACATIFSALTVVFLALTLTSDG* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1551 432 PANTHER SPHINGOMYELIN SYNTHETASE 14 389 IPR045221 GO:0016780
Vvi18g1551 432 Pfam PAP2 superfamily C-terminal 277 344 IPR025749 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1551 - - vvi:100267465 842.417