Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1547 ATGGCTTCCGCACGGTACCTGGACAAGAGCTTCAGCCTTGCTGCTCGATTACATGCGGACGACGACTCATCATCCAAGTGCTGGGAGTCTTTGCTTGAGCTTCAGGCATGCACTGGAGAGGTTGTCCTGTTCTTCCTCAATGGTGAGACTCACCTTGGGGCCGGCTGTTGCCAAGCCATTCAGACCATTGAGCACCAATGCTGGCCTGCCATGCTTACTTCCATTGGTTTCACTGCCGAGGAGGGCGACATCCTCCAAGGTTACTGTGATGCAACCACATCCTCTTCGGCTCCCCCACCACCACCACCACCACCATCCATGGAGCCTAATGACGTGGTTACCTTGGGTGGCTTTTTCCTCGATCCTTAG 369 0.5501 MASARYLDKSFSLAARLHADDDSSSKCWESLLELQACTGEVVLFFLNGETHLGAGCCQAIQTIEHQCWPAMLTSIGFTAEEGDILQGYCDATTSSSAPPPPPPPPSMEPNDVVTLGGFFLDP* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1547 122 Pfam Prolamin-like 26 90 IPR008502 -
Vvi18g1547 122 PANTHER EGG CELL-SECRETED PROTEIN 1.5 3 105 IPR044711 GO:0009567
Vvi18g1547 122 MobiDBLite consensus disorder prediction 90 110 - -
Vvi18g1547 122 MobiDBLite consensus disorder prediction 95 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1547 Vvi-Chr18 19581500 19581868 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1547 - - vvi:104882683 230.335