Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1539 ATGGACGCAATGATTCGAATATCATCCCCATTCGCCATCTTCAACAAACCCCACGACTCTCCAACCTCCTTTTCCTTTTCTGTCCCCTTCTCTCTCAACAAAAACGTCGGCGGTTCAAGAAATTATCAAAAGCTGGGCAGTAGCAGAAGTAGCAGAAACGACGCCGTTTTCGACGAGGCGGCATTCGAGGCCGAGAGGCTCACCCTCGACGCCAGAGCTCGCGAATCCATGGCAGAGGCTTCCAAGAGGGAGACCGAAACGGACCCCAAAGCTTGGAAATGGGTTATCCGAAAGAGGGTTTGGGATTTCATGGAGACCCGCAACATTGCCCAAAATCCTCGCCCCGTTCACCACCGTATCCCCAATTTTGTTGGCGCTGCAGCTGCTGCTCAGAAATTGGGTGGGTTGGAAGCATTTGGGGTTGCCAAATGTGTGAAAGTTAATCCAGATTCGCCACAGAAGCAAGTGAGGTTCCTCACACTCTCTGGTGGAAAAAAGCTATTAACTCCTCAGCCTCGTTTAAGGACGGGCTTTTTCTCTGTTCTGGAATCAAGCATGTTAACCCCTAGCACCATCAATGAGGCATGCACCTCTGTAGGTGTTGCTAAATATGGAAGGCCAATTGGATTAGATGAGCAGATCAAGGTGGACCTTATTGTCATAGGCTCAGTTGCCGTTGACCCAAAGACTGGTGCACGACTTGGCAAGGGTGAGGGGTTTGCAGAACTTGAATATGGGATGTTGCGGTACATGGGAGCCATAGATGACACTACTCCTATTGTCACCTCAGTACATGATGAGCAATTGGTCGATGATATTCCTGTTGAGAAGCTGTTAATCCATGACGTGCCAGTTGATATTATATGCACCCCAACCCAAGTCATTTTTACCAACACCTCAATCCCAAAGCCTCAAGGGATCTACTGGGACAAATTATCTCCTGAGAAGCTTGGTCAAATTCGAATACTCAGAGAACTCAAGAGTAGGATTGAAGGAGAAACCGGACAGAAGCTCCCCTGTGGTCCATCTGAGAAATTGCCACCTACAGCTAAGCGGAAGCGCTGA 1065 0.4883 MDAMIRISSPFAIFNKPHDSPTSFSFSVPFSLNKNVGGSRNYQKLGSSRSSRNDAVFDEAAFEAERLTLDARARESMAEASKRETETDPKAWKWVIRKRVWDFMETRNIAQNPRPVHHRIPNFVGAAAAAQKLGGLEAFGVAKCVKVNPDSPQKQVRFLTLSGGKKLLTPQPRLRTGFFSVLESSMLTPSTINEACTSVGVAKYGRPIGLDEQIKVDLIVIGSVAVDPKTGARLGKGEGFAELEYGMLRYMGAIDDTTPIVTSVHDEQLVDDIPVEKLLIHDVPVDIICTPTQVIFTNTSIPKPQGIYWDKLSPEKLGQIRILRELKSRIEGETGQKLPCGPSEKLPPTAKRKR* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1539 354 SUPERFAMILY NagB/RpiA/CoA transferase-like 92 310 IPR037171 -
Vvi18g1539 354 Gene3D - 127 303 IPR024185 -
Vvi18g1539 354 PANTHER 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE-RELATED 75 354 IPR002698 -
Vvi18g1539 354 MobiDBLite consensus disorder prediction 333 354 - -
Vvi18g1539 354 FunFam 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 124 300 - -
Vvi18g1539 354 Pfam 5-formyltetrahydrofolate cyclo-ligase family 93 291 IPR002698 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1539 K01934 - vvi:100248560 691.419