Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1533 ATGGATTCTCTCAGAGTTCTATTGAAGGAACTGATCCAGAAGGTCTGCGGCAAAACTTCAAACCGGACGTTTTGTGTGGAGACTCTTGAGTCGGACCCCAGAACTCCATTAGCCTACAATCTCGCCAGTCTGGCCAGAATTGCTATAGAGTTGAGCATTGCCAATGTGTCACATACCCAGGCTCTCATCGCCAGCAAGCTGAGGAGCGGTGATACGACTGATCCTGACGTGAAGCATACTCTGAAATGGTGTGTGAATTGGTATACCGAAGTGATTACACTTCTCAGAAGTGCTGTCATGGCCTTGGAGAAGGAACTGATCCAGAAGGTCTGCAGCAAAACTTCAAACCGGACGTTTTGTGTGGAGACTCTTGAGTCGGACCCAAGAACTCCATCAGCCTACAATCTCCCCAGTCTAGCCAGAATTGCTATAGAGTTGAGCATTGCCAATGTGTCAGATACCCAGGCTCTCATCGCCAGCAAGCTGAGAGGTGATACGACTGATCCTGACGTGAAGCATACACTAAAATGGTGTGTGACTTGGTATACTGAAGTGATTGCACTTCTCCGAAGTGCTGTCACGGCCTTGGAGGTAGATATCAAGTCTGCACATCAAAATATTTATACTGCAGGTGAGTATATGGGCTATTGTGAAAGCAACATGGATTATGGCGGGGTCCTGGATTCATGGATTTTGACTGGAAACCAATTCTCCGATTATCTTCTTGATATTGCATTTTTCTCTACAATCGAGGGATTATGA 762 0.4633 MDSLRVLLKELIQKVCGKTSNRTFCVETLESDPRTPLAYNLASLARIAIELSIANVSHTQALIASKLRSGDTTDPDVKHTLKWCVNWYTEVITLLRSAVMALEKELIQKVCSKTSNRTFCVETLESDPRTPSAYNLPSLARIAIELSIANVSDTQALIASKLRGDTTDPDVKHTLKWCVTWYTEVIALLRSAVTALEVDIKSAHQNIYTAGEYMGYCESNMDYGGVLDSWILTGNQFSDYLLDIAFFSTIEGL* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1533 253 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 104 247 - -
Vvi18g1533 253 CDD PMEI 103 220 IPR034086 GO:0043086|GO:0046910
Vvi18g1533 253 Pfam Plant invertase/pectin methylesterase inhibitor 106 221 IPR006501 GO:0004857
Vvi18g1533 253 Pfam Plant invertase/pectin methylesterase inhibitor 11 103 IPR006501 GO:0004857
Vvi18g1533 253 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 10 104 IPR035513 -
Vvi18g1533 253 NCBIfam pectinesterase inhibitor domain 103 225 IPR006501 GO:0004857
Vvi18g1533 253 NCBIfam pectinesterase inhibitor domain 9 103 IPR006501 GO:0004857
Vvi18g1533 253 Gene3D Invertase/pectin methylesterase inhibitor family protein 105 246 IPR035513 -
Vvi18g1533 253 Gene3D Invertase/pectin methylesterase inhibitor family protein 8 104 IPR035513 -
Vvi18g1533 253 SMART PMEI_2 102 248 IPR006501 GO:0004857
Vvi18g1533 253 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 104 246 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1533 Vvi-Chr18 19372185 19379984 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1533 - - vri:117905567 300.441