Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1532 ATGGCAATGACACACCCATTAATCCCTGCCTTCTTCCTTCTGATTACCCCTTTGCTTTTCCTGACCCATTCTCTATCTCCTGCTCATGCAGCATCAGAGCTAGTGGAAGGAGTCTGCCATGAGTCCCAAAACTATGCATTCTGCATTCAGGCTCTGGAGTCGGATCCCAAGACTCCTGCAGCAAAGGACTACATGGATCTAGCCGTGATTTCCCTCAACTTGGGGATTTCAAATGCAACAGACACTCGTTCTTACATTAACGACATGTATGAGAGCCCAGGGACGGATCCCAGTAAGAAGCCTGCCCTCAAGGGCTGCATATCTGGTTATGATGGAGCGGTTGGATCCTTCAAAAGTGCTTTGGGGGAACTGAAGCAGGATCCTTTGACTGCAAACTATGATGCCAAGGTTGCTGGTGATGGCGCAGTGAGTTGTGAGGATCAGTTGGCTTCTGGTGGGGTTAAAGATTCTTCAATTTCTGCTAGGAATCAGTTCACTTTATCCTTGAGTAATATTGCAGATGTGATTACAACCCACTTGCTTCATTAA 549 0.4699 MAMTHPLIPAFFLLITPLLFLTHSLSPAHAASELVEGVCHESQNYAFCIQALESDPKTPAAKDYMDLAVISLNLGISNATDTRSYINDMYESPGTDPSKKPALKGCISGYDGAVGSFKSALGELKQDPLTANYDAKVAGDGAVSCEDQLASGGVKDSSISARNQFTLSLSNIADVITTHLLH* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1532 182 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 10 180 - -
Vvi18g1532 182 FunFam Invertase/pectin methylesterase inhibitor family protein 30 180 - -
Vvi18g1532 182 CDD PMEI-Pla_a_1_like 37 177 IPR034088 -
Vvi18g1532 182 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 181 IPR035513 -
Vvi18g1532 182 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 180 IPR035513 -
Vvi18g1532 182 SMART PMEI_2 30 176 IPR006501 GO:0004857
Vvi18g1532 182 NCBIfam pectinesterase inhibitor domain 11 180 IPR006501 GO:0004857
Vvi18g1532 182 Pfam Plant invertase/pectin methylesterase inhibitor 34 173 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1532 Vvi-Chr18 19370366 19370914 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1532 - - vvi:100265854 355.14