Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1531 ATGGCAATGGCAATGGCAATGGCACACCCATTAATCCCTGCCTTCTTCCTTCTGATTACCCCTTTGCTTTTCTTGACCCATTCTCTATCTCCTGCTCATGCAGCATCAGAGCTAGTGGACGGAGTCTGCCATGAGTCCCAAAACTATTCATTCTGCATTCAGGCTCTGGAGTCGGATCCCAAAACTCCTGCAGCAAAGGACTACATGGATCTAGCCGTGATTTCCCTCAATTTAGGGATTTCAAATACAACAGACACTCGTTCTTACATTAACGACCTGTATGAGAGCCCAGAGACGGATCCCAGTAAGAAGCCTGCCCTCAAGGGCTGCATATCTGGTTATGATGGAGCGGTTGGATCCTTCAAAAGTGCTTTGGGGGAACTGAAGGAGGATGCTTTGACTGCAAACTATGATGCCAAGGTTGCTGGTGATGGCGCAGTGAGTTGTGAGGATCAATTGGCTTCTGGTGGGGTTAAAGATTCTTCAATTTCTGCTAGGAATCAGTTCACTTTATCCTTGAGTAATATTGCAGATGTGATTACAACCCACTTGCTTCATTAA 561 0.4617 MAMAMAMAHPLIPAFFLLITPLLFLTHSLSPAHAASELVDGVCHESQNYSFCIQALESDPKTPAAKDYMDLAVISLNLGISNTTDTRSYINDLYESPETDPSKKPALKGCISGYDGAVGSFKSALGELKEDALTANYDAKVAGDGAVSCEDQLASGGVKDSSISARNQFTLSLSNIADVITTHLLH* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1531 186 CDD PMEI-Pla_a_1_like 37 181 IPR034088 -
Vvi18g1531 186 FunFam Invertase/pectin methylesterase inhibitor family protein 34 184 - -
Vvi18g1531 186 SMART PMEI_2 34 180 IPR006501 GO:0004857
Vvi18g1531 186 Pfam Plant invertase/pectin methylesterase inhibitor 38 177 IPR006501 GO:0004857
Vvi18g1531 186 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 14 184 - -
Vvi18g1531 186 NCBIfam pectinesterase inhibitor domain 15 184 IPR006501 GO:0004857
Vvi18g1531 186 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 185 IPR035513 -
Vvi18g1531 186 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 184 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1531 Vvi-Chr18 19358276 19358836 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1531 - - vvi:100253768 360.533