Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1530 ATGGCAATGGCACACCCAATCCCTGTCTCCTTCTTCCTTGTGACCACCCTTCTGTTTTTCTTGAACCATTCTCTTTCTCCAGCCCATGCAGCATCAGAACTAGTGGAAGGAGTCTGCCATGAGTCCCAAAGCTATTCATTCTGCATTCAGGCTCTGGAGTCGGATCCCAAAACTCCTGCAACGAAGGACTACATGGATCTGGCCGTGATTGCCCTCAAATTGGGGATTTCAAATTCAACTGCCACTCGCTCTTACATTAGTCGCTTGTATAAGAACCCAAAGACGGATCCCAGAAAGAAGCCTGCTCTCAAGGGCTGCTTATCTGGTTATGATGAAGCGGTGGAATCCTTCAAAAGTGCTTTGGGGGAACTGAAGGAGGATCCTTTGACTGCAAACTATGATGCCAAGGTTGCTAGTGATGGTGCAGTGCTTTGTTCGGATTTCTTGGCTTCTGCTGGGATTAAGGATTCATCAATTTCTGATGGGAATCGTTTCACTTCATCTTTCAGAACAGTAGAAATGGAAGATGTTGTAGCCATTGTTGCAGTTGTGGTGAAGGAGAATGGGAAAGAAGACAAAGAAAAACAAGAAAATTGTTAG 600 0.4533 MAMAHPIPVSFFLVTTLLFFLNHSLSPAHAASELVEGVCHESQSYSFCIQALESDPKTPATKDYMDLAVIALKLGISNSTATRSYISRLYKNPKTDPRKKPALKGCLSGYDEAVESFKSALGELKEDPLTANYDAKVASDGAVLCSDFLASAGIKDSSISDGNRFTSSFRTVEMEDVVAIVAVVVKENGKEDKEKQENC* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1530 199 CDD PMEI-Pla_a_1_like 37 172 IPR034088 -
Vvi18g1530 199 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 186 IPR035513 -
Vvi18g1530 199 NCBIfam pectinesterase inhibitor domain 9 164 IPR006501 GO:0004857
Vvi18g1530 199 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 9 173 - -
Vvi18g1530 199 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 165 IPR035513 -
Vvi18g1530 199 SMART PMEI_2 30 184 IPR006501 GO:0004857
Vvi18g1530 199 Pfam Plant invertase/pectin methylesterase inhibitor 34 139 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1530 Vvi-Chr18 19351756 19352852 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1530 - - vvi:104882694 330.872