Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1529 ATGGCAAAGCGAGTCTATCAAGTGTGGCAAGGAAGCAATAAGTTCTTTCTTCATGGGCGGTTCATCTTTGGGCCGGATGCTAAGTCATTGCTTGTCACTTTATTGCTGATCATTGTTCCAGTTACTATTTTTTGTGCACTTGTTGCAAGGCATCTTCGCCATGAATTTTCGCCATATAATGCGGGATATGCAGTTCTGGTGGCTGCAATTGCCTTTACCATCTATGTTTTGCTGCTTCTTTTTCTTACTTCGGCCCGAGACCCAGGTATAATTCCACGTAATTCCCATCCACCTGAAGGAGAGATTCGATATGATTCTTCAGTTGAGGCTGGAGGAAGACATACACCAAGCCTACAATTCCCTCGAACAAAAGAAGTTATGGTCAATGGCATTGCTGTAAAGGTGAAGTATTGTGAGACGTGCATGATATATCGCCCTCCTCGATGCTCGCATTGCTCCATTTGCAACAATTGTGTAGAACGTTTTGATCACCACTGCCCTTGGGTAGGCCAGTGCGTTGGACTGCGCAATTACCGTTTCTTCTTTATGTTTGTTTCTTCTTCAACTCTTCTTTGCATATATGTCTTCGCCATGTCAGCTTTCTATATTAAGGTTCTGATGGATAATCAAAATGACACAGTTTGGAAGGCCATGAAAGAATCTCCTGCATCTGTGATACTCATGGTATATTGTTTTATTTCTCTGTGGTTTGTTGGTGGACTCACAGGCTTCCATTTGTACCTCATAAGCACAAACCAGACTACCTACGAGAATTTCCGGTACAGAGCTGACAACAGGATCAATGTGTATGACCGTGGGTGTGTGAATAATTTTCTTGAAGTATTCTGCTCAAAGATAAAACCCTCAAAGAACAAGTTCCGAGCTTATGTTGAAGAGGAGGTCCAGAGGCCTCCTTTAGCATCCACACATCAAGCAGCAGCAGCAGCAGCAGAAGAAGAAGATCTGAATGCAGATACACGTGAGAAAGTAGAAGATGATCTAGGGATAGGCGAAGACCTCTTGAAGATCTCCCAACGTCGTAATATTGAAGAAATTGATGGGGAATTATGTGACAGAGGGAGCAATGGGCCTCACCATAATTCTTCAGAGGTTGACTCTGTTTTGGATTCAGATTTTCGTTCTCTCACCATCCAAGCGGAGACTCGGCACCCAAGCTGGGGTAGGAGAAGCAGCAGCTGGGAAATTGCACCCGAGGTCCCTGCCACAAACTCCAGAGTTACCGAAAGCAGAAGCCATGTCACTGCAAGGGAAGCAAACCATTAG 1284 0.4447 MAKRVYQVWQGSNKFFLHGRFIFGPDAKSLLVTLLLIIVPVTIFCALVARHLRHEFSPYNAGYAVLVAAIAFTIYVLLLLFLTSARDPGIIPRNSHPPEGEIRYDSSVEAGGRHTPSLQFPRTKEVMVNGIAVKVKYCETCMIYRPPRCSHCSICNNCVERFDHHCPWVGQCVGLRNYRFFFMFVSSSTLLCIYVFAMSAFYIKVLMDNQNDTVWKAMKESPASVILMVYCFISLWFVGGLTGFHLYLISTNQTTYENFRYRADNRINVYDRGCVNNFLEVFCSKIKPSKNKFRAYVEEEVQRPPLASTHQAAAAAAEEEDLNADTREKVEDDLGIGEDLLKISQRRNIEEIDGELCDRGSNGPHHNSSEVDSVLDSDFRSLTIQAETRHPSWGRRSSSWEIAPEVPATNSRVTESRSHVTAREANH* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1529 427 MobiDBLite consensus disorder prediction 404 427 - -
Vvi18g1529 427 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 37 302 - -
Vvi18g1529 427 MobiDBLite consensus disorder prediction 355 374 - -
Vvi18g1529 427 MobiDBLite consensus disorder prediction 304 329 - -
Vvi18g1529 427 Pfam DHHC palmitoyltransferase 136 260 IPR001594 GO:0016409
Vvi18g1529 427 ProSiteProfiles DHHC domain profile. 136 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1529 Vvi-Chr18 19328978 19350107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1529 67 324 Lipid Metabolism Gene Families AT4G22750 25.735 2.78e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1529 K16675 - vvi:100264082 868.996