Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1518 ATGTTATTGGCAGTGGAAGGAGGAGGGTTCTTCTCTTCTTCAGCTTCGGGGTACACTAAGGGCCTGACCCTTCTTCTCTTGGGTCAGAAGAACGAAGAAAAACCCATGAGAGTTTCCCCGTGGAATCAGTACCAGTTGGTGGACCAAGAATCCGACACCGACCTCCAGCTGGCTTCCGGGAAGAACCGGCTTTCCCGCGGGTGCGCTTCCTTTGTCTGCTTTGGTCGCGCTTCCGCAGGACTTGAGGTCCCATCCCCACTGAAGGTGGGCCCTGTTCAACAGCAGGATGGCTTGCCAGGGCCTCCTATTTCAGACAAGGGCAAGGATCATACTACTGATCATGGTGACGATAACAATGAAAGAGATGTTCCTCTTAAGAGTAGCTTGAAAAAACCATTTAATAGTATTCCAGTTTCTGGTGGTGATAATGAATGTGAGCCATTGGGTGAAACATGTAGTGACATCCCCGGTTGCACTGAAAGGAGGAAAGTGCAGTGGACAGATGCATGTGGTAGAGAGCTTGTTGAGATTAAGGAATTTGAGCCCAGTGAAGTGGGCGAGTCGGATGACGAATTCGACAACGGAAGTGAAAGGAGTTGTTCTTGTGCAATAATGTAG 618 0.4951 MLLAVEGGGFFSSSASGYTKGLTLLLLGQKNEEKPMRVSPWNQYQLVDQESDTDLQLASGKNRLSRGCASFVCFGRASAGLEVPSPLKVGPVQQQDGLPGPPISDKGKDHTTDHGDDNNERDVPLKSSLKKPFNSIPVSGGDNECEPLGETCSDIPGCTERRKVQWTDACGRELVEIKEFEPSEVGESDDEFDNGSERSCSCAIM* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1518 205 MobiDBLite consensus disorder prediction 84 145 - -
Vvi18g1518 205 MobiDBLite consensus disorder prediction 106 127 - -
Vvi18g1518 205 MobiDBLite consensus disorder prediction 183 205 - -
Vvi18g1518 205 PANTHER LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTIC 27 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1518 Vvi-Chr18 19145291 19150072 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1518 - - vvi:100854917 408.297