Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1517 ATGGGGAAGAAGAGGAAGTCGGTGGCGACGAGCCTGGACGAGGTCGATCGAACCATGTACGCCACCTTTTGTAGCGCCGCGAACTCGCTTTCGCAGCTCTATACGCAGACCATGAACCAGCAAAAGCTCTCCTTTCAAGCCGGTGAACGCCATGGACTTGAAAAGCTTTATCAATGGATTTTGAGGCAACAAGAGGGAGGTTCAAGAGTGACAACAGTTGATGTACTCAGTTATCTGCAGAATGAACTGGACTATTGTGGAGAGGAGCCACCAATGTCCCCTCGAGCACCAATCGCTTATCAGCATGCCCAACAAATAATGCACCTCCCAAGTTCAGGCTTCCTGGTCTCCTCAGGTTCATCTGCCCACACAAATGCAGGGCAGGGGCCTCGGCCAGAGCACTGTGATCAGCAGCCAAAGAATTCAGTATTTTCAAATGCTCTGTCAAGCCCTGTTCGTCGCAGCCTTCAAAACTATCACTTTCCTCAGGGAGGCTACTGCCCAAATGGTAGTGCACCATTAGGAAACGGAGTCCGTAACGTTGAGACCAATTTCAGCCATCACCAAAACAGAGATTCTAATCCTCCCAGCTCCAATGACTCCTCTATGGACATGCATGCAGATAGCCCAGGTCATGAATCTACTTACTGA 651 0.5008 MGKKRKSVATSLDEVDRTMYATFCSAANSLSQLYTQTMNQQKLSFQAGERHGLEKLYQWILRQQEGGSRVTTVDVLSYLQNELDYCGEEPPMSPRAPIAYQHAQQIMHLPSSGFLVSSGSSAHTNAGQGPRPEHCDQQPKNSVFSNALSSPVRRSLQNYHFPQGGYCPNGSAPLGNGVRNVETNFSHHQNRDSNPPSSNDSSMDMHADSPGHESTY* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1517 216 MobiDBLite consensus disorder prediction 114 149 - -
Vvi18g1517 216 MobiDBLite consensus disorder prediction 186 216 - -
Vvi18g1517 216 PIRSF UCP009193 1 208 IPR016549 -
Vvi18g1517 216 MobiDBLite consensus disorder prediction 186 205 - -
Vvi18g1517 216 PANTHER NUCLEAR RECEPTOR FAMILY 2 GROUP C PROTEIN 1 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1517 Vvi-Chr18 19128954 19136369 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1517 - - vvi:100854952 434.491