Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1512 ATGGAAACGGCGACTACGGGGACAGCGATAACAACGACGACTACGGAGACGACGAAGGCAGCTGTGACGAAGAAGAGGAAGTCGGTGTTCACGAAGGTGGACCAGTTGAAGCCGGGGACCGGTGGCCACACTCTGACGGTGAAGGTGGTGAGCTCTAAGACCGTGTTACAAAATGGTCGATTGGTGTTGCAGCATCTTCGCCACACTCGTATTGCTGAGTGTCTTGTTGGGGATGAGACTAGGGCGATCATCTTCACTGCTCGTAACGATCAAGTTGATATGATAAAGCTGGGCGCCACTGTGATTCTGCACAAAGCAAAGATTGACATGTTTAAGGGATCAATGAGGCTAGCAGTTGACAAATGGGGACGTGTTGAAGTGACCAAGGATGCTAACTTTGTAGTTAAAGAGCAGAACAATCTTTTGCTAGTTGAGTACGAATTGGTTAATGTGCTGGAAGAGTGA 465 0.4882 METATTGTAITTTTTETTKAAVTKKRKSVFTKVDQLKPGTGGHTLTVKVVSSKTVLQNGRLVLQHLRHTRIAECLVGDETRAIIFTARNDQVDMIKLGATVILHKAKIDMFKGSMRLAVDKWGRVEVTKDANFVVKEQNNLLLVEYELVNVLEE* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1512 154 Gene3D - 40 143 IPR012340 -
Vvi18g1512 154 SUPERFAMILY Nucleic acid-binding proteins 19 151 IPR012340 -
Vvi18g1512 154 PANTHER OS05G0244600 PROTEIN 17 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1512 Vvi-Chr18 19069739 19072327 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1512 - - vvi:100253881 226.868