Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1509 ATGGAACACTCAAAGAATTTCAAGTCAGAAGATATGCAAACTCAAATAGAAGGGAAGAATTGCATAGTGACAGGAGCTAATTCTGGTATTGGTTATGCAACTGCTGAAGGTCTTGCTTCACGTGGGGCAAATGTATATATGGTATGCCGTAATAAGGAGAGGGGAGAAGCGGCTCTCTCTGAAATCCAGTCAAAGACTGGGAATAGTAATGTTCATTTGGAGGTGTGTGATCTTTCATCGGTTAGTGAGATCAAGTCTTTTGCATCCAAGTTTTCAAAGAAGGATGTACCGATTCATGTTTTGGTTAACAATGCTGGTTTGCTTGAGTATAACCGGATTACCACATCAGAAGGATTCGAGTTGAATTTTGCTGTAAATGTACTAGGCACTTTCACTATGACAGAATCAATGTTGCCACTGCTGGAAAAAGCTGCTCCTGATGCTCGAGTCATCACAGTTTCTTCAGGTGGAATGTACTCTGTTCCCTTGACCAATGATCTTCAGTTTAGTGATGATAAATTTGATGGTGTGACACAATATGCTCGAAACAAGCGAGTTCAGGTGGCACTGACAGAAAAATGGGCTGAAATGTATAAAAATAAGGGGATTGGATTCTATGCGATGCACCCTGGGTGGGCTGAGACATCTGGACTTGCTAAAAGTTTGCCCGGTTTTTACAAATTGCTATCAGGAAATCTTAGAACGATTGAAGAAGGTGCAGACACGATCATTTGGTTGGCTTTACAGCCAAAAGAAAAATTGGTATCTGGCGCATTCTATTTTGACCGAGCTGAAGCTCCTAAACACTTGATGTTTGCGGCAACCAGGAGCTCTCATGCCATGATTGATTCCATCATTGGCAATCTCCGTTCTTTCTCTGGTCTTTCTGCTCTTTCCTCATAA 903 0.4175 MEHSKNFKSEDMQTQIEGKNCIVTGANSGIGYATAEGLASRGANVYMVCRNKERGEAALSEIQSKTGNSNVHLEVCDLSSVSEIKSFASKFSKKDVPIHVLVNNAGLLEYNRITTSEGFELNFAVNVLGTFTMTESMLPLLEKAAPDARVITVSSGGMYSVPLTNDLQFSDDKFDGVTQYARNKRVQVALTEKWAEMYKNKGIGFYAMHPGWAETSGLAKSLPGFYKLLSGNLRTIEEGADTIIWLALQPKEKLVSGAFYFDRAEAPKHLMFAATRSSHAMIDSIIGNLRSFSGLSALSS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1509 300 PRINTS Glucose/ribitol dehydrogenase family signature 201 218 IPR002347 -
Vvi18g1509 300 PRINTS Glucose/ribitol dehydrogenase family signature 20 37 IPR002347 -
Vvi18g1509 300 PRINTS Glucose/ribitol dehydrogenase family signature 229 249 IPR002347 -
Vvi18g1509 300 PRINTS Glucose/ribitol dehydrogenase family signature 180 199 IPR002347 -
Vvi18g1509 300 PRINTS Glucose/ribitol dehydrogenase family signature 96 107 IPR002347 -
Vvi18g1509 300 Gene3D - 4 280 - -
Vvi18g1509 300 PANTHER DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 12 1 296 - -
Vvi18g1509 300 Pfam short chain dehydrogenase 19 219 IPR002347 -
Vvi18g1509 300 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 264 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1509 Vvi-Chr18 19026978 19032208 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1509 11 210 Miscellaneous Gene Families AT2G29340 28.502 2.52e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1509 K11168 - vvi:100266259 593.578