Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1508 ATGACTGTGAAGAATAATGGGTTGAGTAAAGGTTGTGTTTCTGAAGAATTAAGGAAACTGCTGATATCATTGGCATCAAGCTGGGGAGATGTTGTCGATGACCCGAAAAAGTTGCGGGTGATCCCATTGAAGGGTGCTATGACAAATGAGATTTATCAGATAAATTGGCCTATTGAGGCAGGCACAAGAAGCGTTCTTGTTCGGGTCTATGGTGAAGGTGTTGAGGTTTTTTTCGATCGGGACGATGAAATTAGGACTTTTGAGTGCATGTCTGAGCATGGACATGGGCCTCGCCTTCTTGGGAGGTTTGCAGATGGGCGTGTGGAGGAGTTTATCCATGCAAAGACACTATCAGCTGCTGATCTTCGCGATCCCGAAATATCTGCTCTGGTAGCTGCTAAGTTGAGAGAGTTCCACAGGCTTGAAATGCCAGGGCCTAAGAATGTATTCCTATGGGACAGAATGAGAAACTGGGTTGGTGAGGCCAAAAGATTGTCTTCTCCGAAAGACGCAAAGGAATTCTGCTTGGATACTCTGGAGGAGGAAATCAGTATGCTGCAGAAGGAGTTTTCACAGGACCACCAAGACATTGGGTTTTGTCACAATGATTTGCAGTACGGAAACATAATGATTGATGAGAAAACAAGGGCAATCACTATAATTGACTATGAATATGCAAGTTACAACCCTGTTGCCTATGACCTAGCAAATCACTTCTGTGAAATGGTAGCGAATTATCATACAGATACACCTCATATCTTAGACTATAGTAAATACCCAGACCAGGAGGAGCGCCATAGATTCATCCGCACATACCTCAGCAGTGCAGGTTAG 834 0.4424 MTVKNNGLSKGCVSEELRKLLISLASSWGDVVDDPKKLRVIPLKGAMTNEIYQINWPIEAGTRSVLVRVYGEGVEVFFDRDDEIRTFECMSEHGHGPRLLGRFADGRVEEFIHAKTLSAADLRDPEISALVAAKLREFHRLEMPGPKNVFLWDRMRNWVGEAKRLSSPKDAKEFCLDTLEEEISMLQKEFSQDHQDIGFCHNDLQYGNIMIDEKTRAITIIDYEYASYNPVAYDLANHFCEMVANYHTDTPHILDYSKYPDQEERHRFIRTYLSSAG* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1508 277 Gene3D - 71 275 - -
Vvi18g1508 277 PANTHER CHOLINE/ETHANOALAMINE KINASE 13 274 - -
Vvi18g1508 277 Gene3D Phosphorylase Kinase; domain 1 27 111 - -
Vvi18g1508 277 Coils Coil 176 196 - -
Vvi18g1508 277 SUPERFAMILY Protein kinase-like (PK-like) 31 275 IPR011009 -
Vvi18g1508 277 Pfam Choline/ethanolamine kinase 63 263 - -
Vvi18g1508 277 CDD ETNK_euk 38 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1508 Vvi-Chr18 19024068 19025935 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1508 1 277 Acyl Lipid Metabolism Gene Families AT1G71697 63.830 3.51e-138 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1508 K14156 - vvi:100243934 571.237