Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1497 ATGCTCCCAAAGCCTTCCAACCAGCTAGCAAGTCCAGAAAATGGGGATCCGCTCTTCTTGGAGCCCTTTTGGATCCAGAATGCTGCTAGCAGTGCCATGCTAGTAGCTGGGTGGCATCGGATGAGCTATACGTTTACAAACCAGTCGTTGATCTCACGACTCCTCGAAGATCACATTCGAAAACTACACACTACTGTCGGAAATGCAGTGACACAAGGAAGGTTCATTGTCTTTGGCGCTGGCTCAACCCAACTCCTCAATGCTGCAGTGCATGCCCTTTCACCAGACAATTCATCAGCCCCAGCTAAAGTAGTGGCATCCTTCCCTTTTTACACGGTTTATCAACTACAAACAGATTTCTTTAGATCAGTGAATTTTCAGTTTCAAGGAGACGCATCCCTGTGGAAGAACAAATCAGACAGTACCTTGAATTTCATTGAGTTTGTGACTTCGCCAAATAATCCTGATGGGCAGCTGAAAAAGGCAGTGCTTCAGGGTCCACATGTGAAGACTATTCATGATCATGCCTATTATTGGCCGCACTTTACAGCAATTCCAGCTCCTGCGGATGAAGATCTCATGATATTTACCCTTTCTAAGCTTACTGGTCATGCAGGCACTAGATTAGGATGGGCACTGATAAAGGATGAAGCTCTATACCAGAGAATGTCAACTTATGTGAAAATGAATATCCTAGGTGTTTCCAAGGACACACAGTTAAGAGCTTTGAAACTCCTTAAAGTAGCCCTGGAGGGGAGCGGAAAGGAAATCTTTGAATTTGGTTACACAGCAATGAAGGAACGCTGGGAAAGACTGAGCAATGCATTATCAGAGTCAAAACGTTTCTCTATTCAGGAAATTGCACCACAGTACTGCACCTTTTTCAAAACAGTCAGGGGTCCTTCTCCAGCTTATGCATGGTTCAAGTGTGAAAGAGAAGAGGATAAAGAGTGTTACACAGTCCTCAAAGAAGCCGGCATCATTGGTCGTGAAGGTAATCTGTATGGTGCTGAGACTAGTTATGTGCGGCTCAGCCTCCTCAAAAGCCAGGATGACTTTGATGCATTGCTGCACCAAATAAACAAGTTAGTGGCCCAGGAAGATGGCACCAAAAGTATTATTTGA 1125 0.4471 MLPKPSNQLASPENGDPLFLEPFWIQNAASSAMLVAGWHRMSYTFTNQSLISRLLEDHIRKLHTTVGNAVTQGRFIVFGAGSTQLLNAAVHALSPDNSSAPAKVVASFPFYTVYQLQTDFFRSVNFQFQGDASLWKNKSDSTLNFIEFVTSPNNPDGQLKKAVLQGPHVKTIHDHAYYWPHFTAIPAPADEDLMIFTLSKLTGHAGTRLGWALIKDEALYQRMSTYVKMNILGVSKDTQLRALKLLKVALEGSGKEIFEFGYTAMKERWERLSNALSESKRFSIQEIAPQYCTFFKTVRGPSPAYAWFKCEREEDKECYTVLKEAGIIGREGNLYGAETSYVRLSLLKSQDDFDALLHQINKLVAQEDGTKSII* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1497 374 Pfam Allinase 13 364 IPR006948 GO:0016846
Vvi18g1497 374 Gene3D - 5 51 IPR037029 GO:0016846
Vvi18g1497 374 Gene3D Aspartate Aminotransferase, domain 1 256 365 IPR015422 GO:0003824
Vvi18g1497 374 Gene3D - 52 255 IPR015421 GO:0003824
Vvi18g1497 374 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 31 365 - -
Vvi18g1497 374 CDD AAT_like 15 362 - -
Vvi18g1497 374 SUPERFAMILY PLP-dependent transferases 8 364 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1497 Vvi-Chr18 18840211 18843486 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1497 - - vvi:100252591 731.095