Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1496 ATGCAGAATGCAGCTAACAGTGCAGTGCTGGTGGCTGGATGGCATCGAATGAGCTATAGATTTGATGATCAGAGTTTCATCTCACAAGAACTTGAGAGGCTCATTCGCAGACTACACGCCTCAACCGGGAATGCTATCACAGAGGGAAGATTCATTCTTTTTGGCGCTGGCTCGACCCAACTCATTAACGCTGCAGTTCATGCTCTTTCACCCCATAATTCATCGGCACCAGCAAAAGCATGGCTACAATCCCTTTCTTCCCGGTTTGTCCCAGTACCTGCATTTGTTTCATATTCCATTTTCAGCTTCAATGAAGAATATGCACTTGAAGTAAACTTTTATGTATGGGTATATCAACAACGAACAGACTTCTTTAGGTCAGTGGATTTTCAGTTTCAAGGGGACACATCCTTGTGGAAGAACAATTCAGATAGTACCTTGAATCTTATTGAGGTTGTGACTGCCCCCGATAATCCTGATGGCCAGCTGAATAAAGCAGTTCTTCACGGCCCATACGTGAAGGCTATTCATGATCATGCCTATTATTGGCCGCACTTTACAGCAATTCCAGCACCTGCAGATGAAGATCTCATGATATTTACTCTTTCTAAGCTTACTGGTCATGCAGGCACTACATTCGGGTGGGCTTTGATCAAGGATGAAAGTGTGTACCAAAGAAGGTTAAAATATAAACTGCTGAATGTCCTAGGTGTTTCTAGGGACACTCAGCTAAGAGCTTTGAAACTTCTGAAACTAGTCTTGGAGGGGAGCGGCAGGGAGATATTTAAATTTAGCTACACAACAATGAAGAACCGCCGGGAAAAGTTGAACAATGCCTCATCAGTGTCTGACCGTTTCTCTATCCAGAAAATTGCACCACAATACTGCACTTTTTTCCAAACGGTCAGAGGCAACCTTCTCCAGCTTATGCTTGGTTGA 939 0.4377 MQNAANSAVLVAGWHRMSYRFDDQSFISQELERLIRRLHASTGNAITEGRFILFGAGSTQLINAAVHALSPHNSSAPAKAWLQSLSSRFVPVPAFVSYSIFSFNEEYALEVNFYVWVYQQRTDFFRSVDFQFQGDTSLWKNNSDSTLNLIEVVTAPDNPDGQLNKAVLHGPYVKAIHDHAYYWPHFTAIPAPADEDLMIFTLSKLTGHAGTTFGWALIKDESVYQRRLKYKLLNVLGVSRDTQLRALKLLKLVLEGSGREIFKFSYTTMKNRREKLNNASSVSDRFSIQKIAPQYCTFFQTVRGNLLQLMLG* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1496 312 Gene3D - 27 259 IPR015421 GO:0003824
Vvi18g1496 312 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 5 300 - -
Vvi18g1496 312 Pfam Allinase 1 77 IPR006948 GO:0016846
Vvi18g1496 312 Pfam Allinase 114 303 IPR006948 GO:0016846
Vvi18g1496 312 Gene3D Aspartate Aminotransferase, domain 1 260 306 IPR015422 GO:0003824
Vvi18g1496 312 SUPERFAMILY PLP-dependent transferases 3 304 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1496 Vvi-Chr18 18833613 18834954 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1496 - - vvi:100257726 528.865