Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1495 ATGAATCTTTCACTTCCTTACGCGACCTCTATCCTCTTCTCCTTCCTCATATTTTCCATTTTCATCCCTGCTTTTGCCAGAGGCGGTCAACGCAGCCCCAAATTTTCAGGTGTTATGGATGATAGTTATGTGGGAAATGGACGGCGATTGTCTGAGGTGAATCATTCTAAAGCAAGTGTTGATGTATCACGTGGATATATGACGAATTCTGACCTCGAAAAGGCTGTTAAGGAGTTTGGTCGAAGGTGTAGTAACATTTCCAGGATATATAGTATTGGGAAGAGTGTGAAAGGAGTTCCACTGTGGGTGATGGAAATTTCTGACAAACCAGGGGAGGAAGAAGCAGAACCTGCATTTAAGTTTATTGGAAATGTGCATGGAGATGAACCTGTTGGTCGTGAGCTTCTGTTACTCCTTGCAAATTGGTTATGTGATAACCATATGAAGGATCCCTTGGCAACATTGATCATTGAAAATGTTCACCTGCATATACTTCCTTCCATGAATCCTGATGGATTTTCACTTAGGAGGCGTGGCAATGCAAATAATATTGATCTTAATCGTGATTTTCCAGATCAGTTCTTTCCTCTGAATGATGATGTGGATGGACGACAACCTGAAACAAAAGCAATCATGAGGTGGTTGAAAGAGATACATTTCACAGCATCTGCCAGTTTGCATGGGGGTGCACTTGTTGCAAATTATCCATGGGATGGCACTCAGGATGGAAGGAAAGATTACTATGCATGTCCTGATGATGAGACATTCCAGTTTATGGCAAGCGTATATAGTCGTTCTCATCACAACATGTCTTTGAGCAAGGAATTTGAAGGAGGAATTACAAATGGAGCATTTTGGTACCCCATATATGGTGGCATGCAAGATTGGAACTATATACATGGTGGCTGTTTTGAATTGACACTGGAGATCAGTGACAACAAGTGGCCTAACACTATTGAGCTTCCTACTATATGGGAATATAACAAAATGAGTATGTTAAATCTTGTTGCAAGCCTTGTGAAGACAGGAGTACATGGAAGGATCTTTTCATCAGACAGAGGAAGACCATTGCCTGGCTATATCACAATCAAGGGAATAAATTACACGGTTAAGGCTGGCAGAACATTTGCTGACTACCATCGGCCACTTGCTTCAGGAGAGAAATATGAAGTTGTGGCTACTATGCCAGGTTACAAATCGAAAACCACATCTATCAAATTGGAAGAAGTTACAACAGTAGATTTTCTTCTTGATCCTGAAGTCCTGCCAAGGGGGAACCTACTACGAAGTTTATGTGACTGCAACTGTGAGAGGAAGGGTAGTCTCGAATTGGTTGAGTTTGTTGGGGTCTCCCACTTGGAGGTTTCACTTATTTTAATCGTCATCTTAGTATTCCTTTGCTTTTTATTAAGGAGGAAATTGATATACAACCTTGTAAGACAAAGACACTTAACTGGGCCGAAAAGGTCAGTTGTGGTCTGA 1482 0.4136 MNLSLPYATSILFSFLIFSIFIPAFARGGQRSPKFSGVMDDSYVGNGRRLSEVNHSKASVDVSRGYMTNSDLEKAVKEFGRRCSNISRIYSIGKSVKGVPLWVMEISDKPGEEEAEPAFKFIGNVHGDEPVGRELLLLLANWLCDNHMKDPLATLIIENVHLHILPSMNPDGFSLRRRGNANNIDLNRDFPDQFFPLNDDVDGRQPETKAIMRWLKEIHFTASASLHGGALVANYPWDGTQDGRKDYYACPDDETFQFMASVYSRSHHNMSLSKEFEGGITNGAFWYPIYGGMQDWNYIHGGCFELTLEISDNKWPNTIELPTIWEYNKMSMLNLVASLVKTGVHGRIFSSDRGRPLPGYITIKGINYTVKAGRTFADYHRPLASGEKYEVVATMPGYKSKTTSIKLEEVTTVDFLLDPEVLPRGNLLRSLCDCNCERKGSLELVEFVGVSHLEVSLILIVILVFLCFLLRRKLIYNLVRQRHLTGPKRSVVV* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1495 493 Gene3D - 342 420 - -
Vvi18g1495 493 FunFam Carboxypeptidase D 60 341 - -
Vvi18g1495 493 ProSitePatterns Zinc carboxypeptidases, zinc-binding region 2 signature. 227 237 IPR000834 GO:0004181|GO:0006508|GO:0008270
Vvi18g1495 493 Gene3D Zn peptidases 63 339 - -
Vvi18g1495 493 SMART zn_carb 66 433 IPR000834 GO:0004181|GO:0006508|GO:0008270
Vvi18g1495 493 ProSitePatterns Zinc carboxypeptidases, zinc-binding region 1 signature. 117 139 IPR000834 GO:0004181|GO:0006508|GO:0008270
Vvi18g1495 493 PANTHER PROTEASE M14 CARBOXYPEPTIDASE 55 417 - -
Vvi18g1495 493 SUPERFAMILY Carboxypeptidase regulatory domain-like 343 425 IPR008969 -
Vvi18g1495 493 SUPERFAMILY Zn-dependent exopeptidases 64 337 - -
Vvi18g1495 493 PRINTS Carboxypeptidase A metalloprotease (M14) family signature 224 237 IPR000834 GO:0004181|GO:0006508|GO:0008270
Vvi18g1495 493 PRINTS Carboxypeptidase A metalloprotease (M14) family signature 183 191 IPR000834 GO:0004181|GO:0006508|GO:0008270
Vvi18g1495 493 PRINTS Carboxypeptidase A metalloprotease (M14) family signature 92 104 IPR000834 GO:0004181|GO:0006508|GO:0008270
Vvi18g1495 493 PRINTS Carboxypeptidase A metalloprotease (M14) family signature 117 131 IPR000834 GO:0004181|GO:0006508|GO:0008270
Vvi18g1495 493 Pfam Zinc carboxypeptidase 73 329 IPR000834 GO:0004181|GO:0006508|GO:0008270
Vvi18g1495 493 CDD M14_CP_plant 66 338 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1495 - K07752 vvi:100249088 971.074