Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1490 ATGGCTAGTTCATGTGAAAGATGGATCGATGGTCTCCAATTCTCCTCATTGTTCTGGCCCCCCCCGCAAGATGTGCAGCAACGGAAGGCTCAAATTACTGCCTATGTTGACTACTTCGGTCAGTTCACATCAGAACAATTCCCTGAAGATATTGCTGAGTTGATTCGGAGCCGTTATCCGTCAAAGGAACAGCGCCTTTTTGATGATGTCTTGGCAACGTTTGTTCTTCATCATCCGGAACATGGGCATGCTGTCGTTCTTCCAATTATTTCGTGTATCATTGATGGTACACTGGTGTATGATAGGTGTACTCCTCCTTTTGCCTCTTTCATTTCCTTGGTCTGCCCAAGCAGCGAGAATGAGTATTCTGAACAATGGGCTCTGGCATGTGGGGAGATTTTGCGAATTTTAACTCATTACAATCGCCCAATTTACAAGGTGGAACATCAGAGCAGTGAAGCAGATAGAAGCAGCAGTGGCAGGCATGCTACAACAAGTGACTCTGTAGATGGGAAATCCTCTCAAGGACCGTTACTACAAAATGAGAGGAAACCTTCAAGGCCTTTGTCTCCCTGGATTACTGATATATTGCTTGCTGCACCTCTGGGTATCAGAAGTGACTACTTTCGTTGGTGCGGCGGTGTTATGGGGAAATATGCAGCTGGAGAACTAAAGCCACCTTCAACTGCTTCTACTCGTGGATCTGGAAAGCACCCCCAGCTCATTCCATCAACTCCAAGGTGGGCTGTTGCTAATGGTGCAGGTGTGATATTAAGTGTTTGTGATGAAGAAGTAGCTCGCTATGAGACTGCAACTTTAACAGCAGCTGCAGTTCCTGCACTTCTGCTTCCTCCTCCAACAACAGCTTTGGATGAGCATCTAGTTGCTGGGCTTCCAGCCCTGGAGCCATATGCTCGCCTATTTCATCGCTACTATGCAATTGCTACTCCAAGTGCCACACAACGACTTCTTCTAGGACTACTGGAAGCACCACCATCATGGGCTCCAGATGCTCTTGATGCTGCAGTACAGCTTGTGGAACTTCTTCGGGCAGCTGAAGATTATGCATCAGGCATGAGGCTCCCAAGGAACTGGATGCATTTGCATTTCTTGCGTGCAATTGGTACTGCAATGTCCATGAGAGCAGGGATTGCTGCAGATGCTGCTGCAGCATTACTTTTTCGCGTACTTTCACAGCCTGCATTGCTTTTTCCTCCTCTAAGACAAGTCGAAGGATTTGAATTTCAGCATGAACCTTTAGATGGTTATATTTCATCCTACAAGAAGCAGATAGAAGTGCCTGCAACTGAAGCAACTATTGAAGCCACTGCCCAAGGGATTGCATCAATGCTTTGTGCACATGGTCCCGAGGTTGAATGGAGAATTTGCACCATATGGGAAGCTGCTTATGGCCTAATTCCTTTAAGTTCCTCAGCTGTTGATCTTCCTGAAATTATAGTTGCAACCCCATTGCAACCTCCCATTTTATCATGGAACCTTTATATACCCCTTCTTAAAGTCCTGGAATATCTTCCTCGTGGAAGTCCATCTGAAGCATGTCTCATGAAGATATTTGTTGCTACAGTGGAATCAATTCTTCAGAGGACATTTCCAGCTGAGTCCTCCAGAGAAAATATCAGAAAAACAAGATACCTTTTTGGAATAGGGTCTGCCTCCAAAAACCTGGCTGTGGCTGAGCTTCGTACAATGGTCCATGCACTATTTCTAGAATCATGTGCATCTGTAGAGCTTGCTTCACGCCTTCTTTTTGTTGTGTTAACCGTTTGTGTCAGTCATGAAGCTGCTCAGCAGAATGGAAGCAAAAGACCAAGAGGTGAAGATAGCCATCTTTCTGAGGAAATCACCGAGGACTTGTCAGATGCATCTGGAAATCAGAGAGACACGAAAACCAGAAAAATGAAAAAACAAGGGCCTGTAGCAGCTTTTGATTCTTATGTTCTTGCTGCTGTTTGTGCTCTTGCATGTGAACTTCAATTATTCCCTTTGATTGCTAGGGGAACTAATCATTCAGCCTCTAAAGATGTACAGATCAGAGCAAAGCCTGCAAAATTAAATGGATCTTCTAGTGAATTCCGCAATAGCATTGACTCTGCCATTCGTCATACCCACAGAATATTAGCAATTTTAGAGGCACTCTTTTCACTGAAGCCATCTTCTGTTGGCACCTCTTGGAGTTACAGTTCAAATGAAATTGTTGCTGCTGCTATGGTTGCTGCTCATGTTTCTGAACTATTCAGACGATCAAAAGCTTGTATGCATGCCCTCTCTGTCTTGATGAGATGCAAGTGGGATGAAGAAATCTACACCAGGGCTTCTTCACTCTATAACCTCATTGACATTCATAGCAAAGCTGTTGCATCCATTGTCAACAAGGCAGAACCACTAGAAGCACACTTAATTCATGCAACAGTTTGGAAGGACAGCCCTGGGCATAAAGATGGCAGCAAAGAAGATGACTGTGCAAGCACTAGCTGCTTCAAATCAGTGAATCCCTTGCTTCTGCACTCTGAAGATTCAGCTTATTCAAAAAGTTTACCTCAATTTGAGAAAGCACCACATTTAAATGAAGGCACAGGAAATAGCTTGGGTAAAGGTATTGCAAGCTTCCCATTAGATGCTTCAGAATTGGCCAATTTCCTCACTATGGACAGGCATATAGGATTTAGTTGCAGTGCACAAGTTCTTCTAAGATCAGTACTCGCAGAGAAACAAGAGTTATGTTTCTCTGTTGTTTCACTTCTTTGGCACAAGTTAATTGCAGCCCCAGAAACAAAACCTAGCGCAGAAAGCACTTCTGCCCAACAAGGATGGAGACAGGTGGTTGATGCGCTATGCAACGTCGTATCAGCATCACCGGCAAAAGCAGCTACAGCAGTTGTTCTTCAGGCTGAGAGGGAATTGCAGCCTTGGATTGCTAAAGATGATGATCTAGGTCAGAAGATGTGGAGAATCAACCAAAGAATTGTAAAATTGATCGTGGAGCTAATGAGGAATCATGATAGACCTGAATCGCTAGTAATTTTGTCAAGTGCTTCAGATCTTCTTCTACGTGCCACAGATGGAATGCTTGTGGATGGAGAAGCATGCACGTTACCTCAATTGGAGCTTCTGGAAGCAACAGCTAGAGCAGTTCAACTTGTACTGGAATGGGGAGAATCTGGATTGGCTGTTGCAGATGGCCTTTCAAACCTGTTAAAGTGTCGTGTACCAGCTACCATCCGATGCCTTTCTCATCCAAGCGCACATGTCCGTGCCCTCAGCACATCAGTTCTTCGTGATGTTCTGCAAAGTGGCTCAATAAAACCTCATATCAAACAAGGGGGCAGAAATGGCATCCACTCTTATCAGTATGTAAATTTAGGCATCATTGACTGGCAAGCAGATATTGAAAAATGCTTGACATGGGAAGCTCATAGCAGGCTAGCTACTGGAATGACTAATCAATTCCTTGATGTTGCTGCCAAGGAACTAGGCTGTACTATTTCCATTTAA 3513 0.4438 MASSCERWIDGLQFSSLFWPPPQDVQQRKAQITAYVDYFGQFTSEQFPEDIAELIRSRYPSKEQRLFDDVLATFVLHHPEHGHAVVLPIISCIIDGTLVYDRCTPPFASFISLVCPSSENEYSEQWALACGEILRILTHYNRPIYKVEHQSSEADRSSSGRHATTSDSVDGKSSQGPLLQNERKPSRPLSPWITDILLAAPLGIRSDYFRWCGGVMGKYAAGELKPPSTASTRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYETATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRAAEDYASGMRLPRNWMHLHFLRAIGTAMSMRAGIAADAAAALLFRVLSQPALLFPPLRQVEGFEFQHEPLDGYISSYKKQIEVPATEATIEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLSSSAVDLPEIIVATPLQPPILSWNLYIPLLKVLEYLPRGSPSEACLMKIFVATVESILQRTFPAESSRENIRKTRYLFGIGSASKNLAVAELRTMVHALFLESCASVELASRLLFVVLTVCVSHEAAQQNGSKRPRGEDSHLSEEITEDLSDASGNQRDTKTRKMKKQGPVAAFDSYVLAAVCALACELQLFPLIARGTNHSASKDVQIRAKPAKLNGSSSEFRNSIDSAIRHTHRILAILEALFSLKPSSVGTSWSYSSNEIVAAAMVAAHVSELFRRSKACMHALSVLMRCKWDEEIYTRASSLYNLIDIHSKAVASIVNKAEPLEAHLIHATVWKDSPGHKDGSKEDDCASTSCFKSVNPLLLHSEDSAYSKSLPQFEKAPHLNEGTGNSLGKGIASFPLDASELANFLTMDRHIGFSCSAQVLLRSVLAEKQELCFSVVSLLWHKLIAAPETKPSAESTSAQQGWRQVVDALCNVVSASPAKAATAVVLQAERELQPWIAKDDDLGQKMWRINQRIVKLIVELMRNHDRPESLVILSSASDLLLRATDGMLVDGEACTLPQLELLEATARAVQLVLEWGESGLAVADGLSNLLKCRVPATIRCLSHPSAHVRALSTSVLRDVLQSGSIKPHIKQGGRNGIHSYQYVNLGIIDWQADIEKCLTWEAHSRLATGMTNQFLDVAAKELGCTISI* 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1490 1170 MobiDBLite consensus disorder prediction 149 187 - -
Vvi18g1490 1170 MobiDBLite consensus disorder prediction 603 641 - -
Vvi18g1490 1170 MobiDBLite consensus disorder prediction 606 641 - -
Vvi18g1490 1170 MobiDBLite consensus disorder prediction 157 181 - -
Vvi18g1490 1170 PRINTS Protein GIGANTEA signature 183 203 IPR026211 GO:2000028
Vvi18g1490 1170 PRINTS Protein GIGANTEA signature 203 221 IPR026211 GO:2000028
Vvi18g1490 1170 PRINTS Protein GIGANTEA signature 277 295 IPR026211 GO:2000028
Vvi18g1490 1170 PRINTS Protein GIGANTEA signature 301 321 IPR026211 GO:2000028
Vvi18g1490 1170 PRINTS Protein GIGANTEA signature 4 22 IPR026211 GO:2000028
Vvi18g1490 1170 PRINTS Protein GIGANTEA signature 345 365 IPR026211 GO:2000028
Vvi18g1490 1170 PRINTS Protein GIGANTEA signature 377 399 IPR026211 GO:2000028
Vvi18g1490 1170 PRINTS Protein GIGANTEA signature 509 530 IPR026211 GO:2000028
Vvi18g1490 1170 PRINTS Protein GIGANTEA signature 232 250 IPR026211 GO:2000028
Vvi18g1490 1170 PRINTS Protein GIGANTEA signature 122 146 IPR026211 GO:2000028
Vvi18g1490 1170 PRINTS Protein GIGANTEA signature 326 345 IPR026211 GO:2000028
Vvi18g1490 1170 PRINTS Protein GIGANTEA signature 449 472 IPR026211 GO:2000028
Vvi18g1490 1170 PRINTS Protein GIGANTEA signature 250 271 IPR026211 GO:2000028
Vvi18g1490 1170 PANTHER PROTEIN GIGANTEA 1 1168 IPR026211 GO:2000028
Vvi18g1490 1170 MobiDBLite consensus disorder prediction 223 244 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1490 K12124 - vvi:100254197 2271.51