Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1482 ATGACTGAAGATATGTTCTACCATGGATTTTGCCTTATTGATTTCAGGGTGATGGATGACTGCTTGAAGGAAACTACTGGAGTTTACTATGTGTTTAACTTTGCTGCTGAATCATTTTCTTCTGGTAATTTGGAGGACTTTCAATCACGACCAGCGCAGCCAGAGTGGGATCAAAACATAGAGGGAAAAGGTGGAATTGCACCCACAGTTGAAGAATTGGCTGGAGCTTTGAAAAGTCACGACCTCTTTACATGTATTGGCCATGGAAGTGGGGCACAGTATATTCCCAGGCATGAGGTTCAGAAACTGGAAAATCGTGCTGCTGCTCTCCTAATGGGATGCAGTAGTGGATCATCATTGCCTCCAAATGGGAAATACACTCCACAGGGTACTCATCTTTCCTATCTATCAGCTGGTTTCCTTGTTATAGTTGCCAATCTATGGGAAGTGACAGACAATGATATTGACCGATTTGATAAGGCCAATCTTGATGCTTAG 498 0.4297 MTEDMFYHGFCLIDFRVMDDCLKETTGVYYVFNFAAESFSSGNLEDFQSRPAQPEWDQNIEGKGGIAPTVEELAGALKSHDLFTCIGHGSGAQYIPRHEVQKLENRAAALLMGCSSGSSLPPNGKYTPQGTHLSYLSAGFLVIVANLWEVTDNDIDRFDKANLDA* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1482 165 Pfam Peptidase family C50 41 155 - -
Vvi18g1482 165 ProSiteProfiles SEPARIN core domain profile. 25 125 IPR030397 GO:0004197|GO:0006508
Vvi18g1482 165 PANTHER EXTRA SPINDLE POLES 1-RELATED 47 163 IPR005314 GO:0004197|GO:0005634|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1482 Vvi-Chr18 18364207 18365185 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1482 K02365 - vvi:100259948 184.882