Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1481 ATGGAGATCATTGAAACTGCTCTTCAAAATGGAGGAGAACCCAATCAATCCGATGCTTTCACCATTAATGGCCAACCAGGAGATCTTTACGATTGCTCCACAGAAGGGACGTTCAAAATGATGGTTGATTATGGAAAAACTTATCTTCTTCGCATCATCAATGCTATTATGAACGAGGAAATGTTTTTCATGGTTGCAAATCATAGCTTGACTGTTGTGGGAACCGATGGGGCTTACATTAAGCCCATAAACACCAGCTATATCATGATAACCCCAGGACAAACAATGGATGTCCTCATCACGGCGGATCAGTCTCCTAGTTACTATTATATGGCATCTAGGGCATATGCTGTGGTAGGGGCATATGATAATACTACCACAACTGCAATAGTGCAATATAATGGAAACTACACTCCCCCATCAACACCTCCACTTCCCAATCTTCCCAATTATACAGACACTGACGCAGCAGCCAATTTTACTGTGCGCCTTAGATCCCTAGCCAACGAAGACTACCCAGTAGACGTTCCACAAACTGTGGATACCCATATGTATATCACAATTTCTATGAACACTTTGCCATGTGTAAACAATTCATGTGATGGGCCCGATGGCTCAAGGCTTGCTTCAAGCTTGAACAACATAAGTTTCGTGGAGCCATCAATCGATGTGTTACAGGCGTACTACAAGGGTATTAACGGTGTTTACGACACCGATTTCCCAAATGAGCCACCTTATTATTTCAATTTCACAGGGGACGATTTGCCCGATACTTTATTGACGCCAGAACGGGGGACTAAAGTCAAAGTGTTGGATTATAATTCTAATGTGGAGATAGTGTTCCAAGGGACTAATGTGATGAATGCAGCGGAGAATCATCCAATGCATTTGCATGGGTACAGCTTTTACGTGGTTGGAAATGGTACTGGGAACTTCGACAATAGCACTGATCCGACGAGGTACAATTTGGTTGATCCGCCTGAAGTCAATACCGTTGGAGTCCCCAAGAATGGATGGGTTGCCATCAGATTCAGAGCTGATAATCCAGGGGTATGGTTCATGCATTGTCATTTGGAAAGACATGCTAGCTGGGGCATGGACACTGTTCTAATTGTGAAGAATGGAACCACTTCATCAACTAGTATGCTGGAACCACCTAGTTACTTGAATCCTTGCTGA 1179 0.4343 MEIIETALQNGGEPNQSDAFTINGQPGDLYDCSTEGTFKMMVDYGKTYLLRIINAIMNEEMFFMVANHSLTVVGTDGAYIKPINTSYIMITPGQTMDVLITADQSPSYYYMASRAYAVVGAYDNTTTTAIVQYNGNYTPPSTPPLPNLPNYTDTDAAANFTVRLRSLANEDYPVDVPQTVDTHMYITISMNTLPCVNNSCDGPDGSRLASSLNNISFVEPSIDVLQAYYKGINGVYDTDFPNEPPYYFNFTGDDLPDTLLTPERGTKVKVLDYNSNVEIVFQGTNVMNAAENHPMHLHGYSFYVVGNGTGNFDNSTDPTRYNLVDPPEVNTVGVPKNGWVAIRFRADNPGVWFMHCHLERHASWGMDTVLIVKNGTTSSTSMLEPPSYLNPC* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1481 392 SUPERFAMILY Cupredoxins 177 377 IPR008972 -
Vvi18g1481 392 NCBIfam laccase 2 392 IPR017761 GO:0046274|GO:0048046|GO:0052716
Vvi18g1481 392 SUPERFAMILY Cupredoxins 7 169 IPR008972 -
Vvi18g1481 392 ProSitePatterns Multicopper oxidases signature 2. 355 366 IPR002355 GO:0005507
Vvi18g1481 392 PANTHER MULTI-COPPER OXIDASE 2 378 IPR045087 -
Vvi18g1481 392 Gene3D - 193 392 IPR008972 -
Vvi18g1481 392 CDD CuRO_2_LCC_plant 1 133 IPR034285 -
Vvi18g1481 392 CDD CuRO_3_LCC_plant 235 375 IPR034289 GO:0005507
Vvi18g1481 392 Pfam Multicopper oxidase 10 136 IPR001117 -
Vvi18g1481 392 Gene3D - 1 169 IPR008972 -
Vvi18g1481 392 ProSitePatterns Multicopper oxidases signature 1. 350 370 IPR033138 -
Vvi18g1481 392 Pfam Multicopper oxidase 242 374 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1481 Vvi-Chr18 18349989 18351389 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1481 K05909 - vvi:100259656 803.512