Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi18g1479 | ATGGAGATGATCAACACTTCCCTTAGAAGTGGTGGAGATCCCAAGACAGCAGATGCTTTCACCATCAATGGCCAACCAGGAGATTTATACAATTGTTCCAAAGAAGGGACATTCAGAATGACCGTTGATCATGGCCGGACTTATCTCCTTCGCATCATCAATTCTATTATGAATGATGAAATGTTCTTCATGGTTGCTCATCATAACTTGATTGTTGTCGGTATTCATGGCCCTTACATTAAGCCCATAAGGACCAGCTATATCATGATAATCCCAGGACAAACCATGGATGTTCTTATCAAAGCGAATCAGTCACCTAGTCAGTACTATATGGCATCTAGGGCATATGCCGGTGTGGTATATGGAAACACTACCACAACTGCAATCCTGCAATATAGTGGAAACTACACTGCCCCATCAACACTTTTGTTTCCTAATCTTCCCAATTTTACAGACATTGATTCTGCAACCAATTTCACAGAGCGCCTAGCAAGGACCATCCAGTAG | 507 | 0.4221 | MEMINTSLRSGGDPKTADAFTINGQPGDLYNCSKEGTFRMTVDHGRTYLLRIINSIMNDEMFFMVAHHNLIVVGIHGPYIKPIRTSYIMIIPGQTMDVLIKANQSPSQYYMASRAYAGVVYGNTTTTAILQYSGNYTAPSTLLFPNLPNFTDIDSATNFTERLARTIQ* | 169 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi18g1479 | 168 | PANTHER | MULTI-COPPER OXIDASE | 2 | 164 | IPR045087 | - | |
| Vvi18g1479 | 168 | SUPERFAMILY | Cupredoxins | 8 | 154 | IPR008972 | - | |
| Vvi18g1479 | 168 | Gene3D | - | 2 | 167 | IPR008972 | - | |
| Vvi18g1479 | 168 | CDD | CuRO_2_LCC_plant | 1 | 132 | IPR034285 | - | |
| Vvi18g1479 | 168 | Pfam | Multicopper oxidase | 7 | 135 | IPR001117 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi18g1479 | Vvi-Chr18 | 18303806 | 18304424 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi18g1479 | K05909 | - | csin:114308365 | 266.544 |