Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1469 ATGAGTAATATGTGTCATGTTTGTGGTGCAAAGTTGACAAATTCGAGGGAGGACAAGGATAAACACAAGAATGAGAATTCACTAAAATTAAATGGAGATCCCATTAGTTCTTGTAAATTGTGTGGGCAGAAGCACCATCAAGAAGCATTAAAATGGGATGATTTGAGTTCTTATCCTTCACGGATATCAAGTCCACCAATTTCATTGACAAGCAGTGATAGCACTGTCTCAAGCTGCAGTGAATTTTCAGTTGATATAAATTCATATGGAAGGGTTAATCAAGATGAAAGTACTGCAGAAAGCAGAACTGAGGATGCTAGTTCTAGTCTAAATGGACATTTGCAGAACTCAAACATGGCAACTCAAGCAGATGGAATTGATAGATCCAACACACTAATAGAAAACAGCCTTAAGAATAATGGACACATGGGAAGAGATGTGGAAATCAGCGGAACTAATGATGGTCAAGAAGGAAGAGATACTGGTGTTTTTAAAACTAATGGATTCTCCAAAGTAGGAACTGATATTTCTTATGATAATGAGAAGGATGCCATAATTTGGGAACCCCCGGAACCAGAGGATGACATGGAGTGTAGCATGGCTAATAGTGATGACGACGATGAGTTTGGTGATGGTACGAAATGGGGAGAGCCAAGTTCCTTGTGTAGCTTTGGAGAAGAAGGCAGCGGGAGCTACAAGTTTAGGGATGAAAAACAAAAGGCAATGGAAGAGGTTATAAATGGGAAGTTCAAGACTCTCGTGAATCAACTTCTTAAATCTGTGGGTGTTGCCTCTTCAGGGAAAGATGGTGAAAGCTGGGTGGATATAGTTACTTCTTTATCATGGGAAGCTGCTTCATTTGTGAAACCTGATGCCATTGAGGGTAAAGCAATGGATCCAGATGGCTATGTGAAGGTGAAATGCATTGCAGCTGGTTCTCGCAACCAAAGTCAAGTAATTAAAGGACTGGTCTTTAAAAAGCATGCTGCTCATAAGCACATGCAGACAAGGTACAAGAACCCTCGACTGTTGTTGATTCAGGGCATGCTTGGTCATTCTTCAAGTGGGTTATCATCATTTAATTCAATGGATCAGGAGAAGGGTAATCTGAATTCTGTTCGTGAGATGATAGATGTGTGTCGCCCGAATGTAGTTTTAGTGGAGAAAACTGTTTCTCGTGATGTGCAAGAGACTTTTCTTGAAAAAGGAGTGACACTAGTCTTTGATATGAAGCTCCATCGCTTGGAACGAGTTGCTCGCTGTACTGGTTCACCAATAATGTCCCCTGGAACTTTAATGAGCCAAAAGCTGAAACATTGTGATTCCTTTCATTTTGAAAAATTTGTGGAGGAACATGCTAGTGTGGGTGAAGGTGGAAAAAAGCCAAGTAAGACCTTGATGTTCATTGAGGGCTGTCCTACACGGCAAGGTTGTACGATTTTACTGAAAGGAACTCACAGTGAGGAATTGAAGAGGGTTAAATGTGTTATGCAGTGTGCAGTTGTTATGGCATATCATTTAATTTTAGAGACTTCTTTCCTTGTTGATCAAAAAGCAATGATCTCTACTATTCCTTTTGATGGGTTAGCAAATCTAGCGCCAACTAATCCACAATTCCCTGTTGTTGGCTCTGGTAATTCAAGTGCCTCTTGTCTTGAGGAGCCTATTGCCAAAGATGATGCATTACGCTTGAGTGATGTTCCTGTTTCAAATGGATTCCTTGAAGGAGCGTCCACCCTAAATTTGGAATTAGAAGGTGATTCTTCATTATCTTATGAGCCATATAACCCAGTTGTTCTTTCGGGGTTATCGTCTCTTTCAGCCTCCATAAAGAAAGTTATAGGGGACAATTTCCCTATTGTATCCTCAACTCCTTATCACTCGCTATCTTCATACTTTGGCTTAAATGGAAAGGAACACCACAATAAGATCATGACGTCAGTTCCAGTTTTGAAATCTCCAGAGGCATTTGAAAATTGTGATATGGAAGCAAAAAGTGGTTCTGATGAAGAGAAGTCACATGATAGCAAAAGACCACTGTCACCCTTGGCTTGCTCTGATGTTCCTTTGAATGACGTAAAATCTGGTGGCAAAAATGAAGACCAAATGCAAAGTAAGGATGACATTAGCACAGTTTTGGACTCCCAGAGCATTTTGGTTCTGATGTCAAGTCGGAATGCATCAAAAGGGAGGATCTGTGAGCAAAGCCATTTTTCTCATATCAAGTTCTACAGGAACTTTGATGTTCCCCTTGGGAAATTTTTGCAAGATAATTTACTCAATCAGAAGCATCAATGCCCCACATGTGGTGAACTGCCAGAAGCTCATTTTTACTACTATGCACATTGCAATAAGCAGCTTACCATACAAGTTAAACAACTTCCCACCAAGTCATGTTTGCCTGGGGAAGCAGAAGGAAAACTTTGGATGTGGAGTCGCTGCGGTAAATGTAAACCTGAGAATGGAATCACACAATGTACAAAAAGAGTGTTGATATCCACTGCTGCTCGTGGCTTGTCCTTTGGAAAGTTTTTGGAGCTCAGTTTTTCACAGCTGTCTTCACCCAGTAGGGTATCAAGCTGTGGGCATTTTTTTCACAGGGACTTCCTCTACTTTTTTGGGTTAGGTCCCATGGTTGCAGTGCTCAGATATTCTCCTGTCTCAACTTATGCTGTAGATGTACCTCCTCATAAGCTGGAATTCAGTAATTCAATTAGACAAGAATCTCTCAAGAAGGAAATGGAGAATGTCTACATGAAAGCGATATCACTGTTCACAGAGGTTGCTAATGCTTTGAAGAAGATAGCATCTCGGTTTGCAGGCTCCACTCTGAATCTTGGTGGTTCATTGAAAGAATTTTCTGATGTTGAAGAGATGTTAAGCCAGGAGAGATATGAATTTGAGGTCAACATTCAAAAAGCTATTGTTAGGAATGGGAAGCCAGAGCAGGCCATTTATAAACTTCTCAGCTTGAACAGATTACTCTGGGAGCTTCAACTTGAATCATGCTTATGGGATAGGCGTTTGCATGCACTACTCTCGCCTGATTCTTCAGTGGTTGGCACTAGTGCCACTCATAAAGCAATTCAAGGGCTTCTGAAGAAGGATGGCATTGCTGGCAATGGAATCCTGCGGGCAGAAAATATTTTGGATACTGGCGATAAAGGTTTCTATAATAGTGGCAATGTGAAAACAAAGTTGGAGACAAGAGATCAGGGAAATGAGTTGTCAATCAGGGAAATCCCTGTTGAGGGTCCTGTTGAAATGTCTAGAGAACAAGCTGATCCATTCAATTCATCAACTGTGGCTGTGGATACTGAGGGGTCAACTTTGGGGTATTTACACACATATGGATCAGTCTCAGAGAGACCTGTTTTCTCTGACCATGTTCATTCTGGTGATGAAAATTGCAAAGGAGAGACACTTCCATCCTTGGATCATTTAGAAGCTGTTAGAATCATTCCTATTACCGGAGGACTTGGACACAATGATTCTTTTGGTGGTCTAGATGCATCTCAAAGGAGTTCATCTCATCCATTGGCATGCAACTTGGAGAAGGCAAAAGGATGGATCTGGTCTCCATTTCCAGAAATTAGGAGGGATTGCATGAAGGATCTCCAGGGAGGTTACTTGCCCAAATTTGAATCTATTAGTAGCTACACACCAGAATATTTACCCTCAGCTTATCAACTGATCATTGAGGAGGGCTCAAGGCTGCATATCCCTCTTGGTACTGATGATTATATTGTCTCAGACTATGAGGGTGAACTTTCAAGCATAATCTCTTGTGCCCTGGCCTTGTTGAAGGATGTACCTGTACCAGCAGAAGATTTTGATGAGGGTAGTAGGAGAGAGAGAGGATTGGCCTTTCGAGCATTGGAAAATTCACACAGCCTGAATCGAATTACGTCAATGCCTTCATCTCATTGGCATTCAAATGGTTCTGTGGATTCAGATGGAAGTGTTTCTTCTGAGGAGTCTCTCTTCTCCAGTTTTGATGGATTTAATTTGTTGGATTCTCTGGTTTCTTATGGTGCCATTCATCCTGAGGTCTCTCTTGGAGTTGCAAAATCACCTGGAAAGGGTAAATATTCAGTGGTTTGTTTATATGCCAACCAGTTCCGCAATCTTCGAGATCAGTGCTGTCCATCTGAGCTTGATTACATCGCCTCCCTCAGCCGATGTAGGAACTGGGATGCCAAAGGTGGGAAAAGTAAATCTTTCTTTGCTAAAACACTGGATGACAGGTTTATCATAAAGGAAATTAAGAAGACAGAATTCGAATCCTTTATGAAGTTTGCTCCTGATTATTTTGCTTACATGAATCACTCCTTCACATCGGGGAGCCAAACTTGCCTTGCCAAAATTCTTGGGATTTATCAGGTAATTATTAGACAGACAAAGAGTGGGAAAGAGATGAGACATGATCTGATGGTGATGGAGAATCTTACTTTCTGTAGAAGCATTACTCGCCAGTATGATCTCAAAGGTGCTTTACATGCTCGATACAATTCAGCTGCTGATGGTCCAGAAGATGTTCTCTTGGACCAGAACTTTGTTAATGACATGAACACCTCTCCTGTGTACGTTAGTAGGAAAGCGAAGCGTGTCTTGCAGCGGGCAGTTTGGAATGACACAACTTTCCTCAATTCAATTAATGTCATGGATTATTCTCTACTGGTGGGAGTGGATACTCAGCGGCATGAGCTTGTTTGTGGCATTATTGATTATCTCAGGCAGTACACATGGGACAAGCAACTTGAGACATGGGTCAAGTCTTCCCTTGTTGTCCCTAAGAATGTTTTGCCAACCGTCATCTCTCCAAAAGAGTACAAAAAGAGATTCAGGAAGTTCATGTCTACATACTTTTTTAGTGTCCCAGATCACTGGTGCTCACAAAGGTCTTCCAATCCTTGTGAACTTTGTGGCATCAGAGAGGACGAGTCTTCTTCTCAATTGAAAGCCCAGAAGCAGGGGGAGCAAAATGGTTTTTCAGCTTGA 5001 0.4155 MSNMCHVCGAKLTNSREDKDKHKNENSLKLNGDPISSCKLCGQKHHQEALKWDDLSSYPSRISSPPISLTSSDSTVSSCSEFSVDINSYGRVNQDESTAESRTEDASSSLNGHLQNSNMATQADGIDRSNTLIENSLKNNGHMGRDVEISGTNDGQEGRDTGVFKTNGFSKVGTDISYDNEKDAIIWEPPEPEDDMECSMANSDDDDEFGDGTKWGEPSSLCSFGEEGSGSYKFRDEKQKAMEEVINGKFKTLVNQLLKSVGVASSGKDGESWVDIVTSLSWEAASFVKPDAIEGKAMDPDGYVKVKCIAAGSRNQSQVIKGLVFKKHAAHKHMQTRYKNPRLLLIQGMLGHSSSGLSSFNSMDQEKGNLNSVREMIDVCRPNVVLVEKTVSRDVQETFLEKGVTLVFDMKLHRLERVARCTGSPIMSPGTLMSQKLKHCDSFHFEKFVEEHASVGEGGKKPSKTLMFIEGCPTRQGCTILLKGTHSEELKRVKCVMQCAVVMAYHLILETSFLVDQKAMISTIPFDGLANLAPTNPQFPVVGSGNSSASCLEEPIAKDDALRLSDVPVSNGFLEGASTLNLELEGDSSLSYEPYNPVVLSGLSSLSASIKKVIGDNFPIVSSTPYHSLSSYFGLNGKEHHNKIMTSVPVLKSPEAFENCDMEAKSGSDEEKSHDSKRPLSPLACSDVPLNDVKSGGKNEDQMQSKDDISTVLDSQSILVLMSSRNASKGRICEQSHFSHIKFYRNFDVPLGKFLQDNLLNQKHQCPTCGELPEAHFYYYAHCNKQLTIQVKQLPTKSCLPGEAEGKLWMWSRCGKCKPENGITQCTKRVLISTAARGLSFGKFLELSFSQLSSPSRVSSCGHFFHRDFLYFFGLGPMVAVLRYSPVSTYAVDVPPHKLEFSNSIRQESLKKEMENVYMKAISLFTEVANALKKIASRFAGSTLNLGGSLKEFSDVEEMLSQERYEFEVNIQKAIVRNGKPEQAIYKLLSLNRLLWELQLESCLWDRRLHALLSPDSSVVGTSATHKAIQGLLKKDGIAGNGILRAENILDTGDKGFYNSGNVKTKLETRDQGNELSIREIPVEGPVEMSREQADPFNSSTVAVDTEGSTLGYLHTYGSVSERPVFSDHVHSGDENCKGETLPSLDHLEAVRIIPITGGLGHNDSFGGLDASQRSSSHPLACNLEKAKGWIWSPFPEIRRDCMKDLQGGYLPKFESISSYTPEYLPSAYQLIIEEGSRLHIPLGTDDYIVSDYEGELSSIISCALALLKDVPVPAEDFDEGSRRERGLAFRALENSHSLNRITSMPSSHWHSNGSVDSDGSVSSEESLFSSFDGFNLLDSLVSYGAIHPEVSLGVAKSPGKGKYSVVCLYANQFRNLRDQCCPSELDYIASLSRCRNWDAKGGKSKSFFAKTLDDRFIIKEIKKTEFESFMKFAPDYFAYMNHSFTSGSQTCLAKILGIYQVIIRQTKSGKEMRHDLMVMENLTFCRSITRQYDLKGALHARYNSAADGPEDVLLDQNFVNDMNTSPVYVSRKAKRVLQRAVWNDTTFLNSINVMDYSLLVGVDTQRHELVCGIIDYLRQYTWDKQLETWVKSSLVVPKNVLPTVISPKEYKKRFRKFMSTYFFSVPDHWCSQRSSNPCELCGIREDESSSQLKAQKQGEQNGFSA* 1667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1469 1666 SUPERFAMILY SAICAR synthase-like 1335 1624 - -
Vvi18g1469 1666 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1568 1621 IPR002498 GO:0016307|GO:0046488
Vvi18g1469 1666 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1401 1566 IPR002498 GO:0016307|GO:0046488
Vvi18g1469 1666 MobiDBLite consensus disorder prediction 103 138 - -
Vvi18g1469 1666 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1346 1482 IPR027484 -
Vvi18g1469 1666 SUPERFAMILY GroEL apical domain-like 316 484 IPR027409 -
Vvi18g1469 1666 MobiDBLite consensus disorder prediction 662 707 - -
Vvi18g1469 1666 SMART PIPK_2 1335 1624 IPR002498 GO:0016307|GO:0046488
Vvi18g1469 1666 FunFam Putative 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding family 1304 1482 - -
Vvi18g1469 1666 CDD Fab1_TCP 253 517 - -
Vvi18g1469 1666 MobiDBLite consensus disorder prediction 662 678 - -
Vvi18g1469 1666 Gene3D GroEL 315 484 IPR027409 -
Vvi18g1469 1666 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1484 1624 - -
Vvi18g1469 1666 Pfam TCP-1/cpn60 chaperonin family 253 510 IPR002423 GO:0005524
Vvi18g1469 1666 Gene3D - 1484 1624 - -
Vvi18g1469 1666 CDD PIPKc_PIKfyve 1363 1623 IPR044769 GO:0000285
Vvi18g1469 1666 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 5 1636 - -
Vvi18g1469 1666 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 315 484 - -
Vvi18g1469 1666 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1294 1623 IPR002498 GO:0016307|GO:0046488
Vvi18g1469 1666 MobiDBLite consensus disorder prediction 91 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1469 Vvi-Chr18 18029846 18041590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1469 334 1633 Acyl Lipid Metabolism Gene Families AT1G34260 48.757 0.0 1145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1469 K00921 - vvi:100242669 3291.13