Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1467 ATGGCTCTGAAGGCCACCAGCTTCACCTCAACCCTCCACCCATCTCTCTGTTCAGTCTCTTCTCTCTTCCTCTTCACTCTCATCTCCATTCTTTCAGTCTCTCTGTTCTTCCTCTTCACCACTGCTAACCAGTCCAAATCCATTTCATCTCAATCTATCATCTCCCAGACAACCCCCCAAGCCTCCATCAAAGTCTACGTTGTAGACCTCCCCAGATCCCTCAACTACGGCCTCCTCGACACCTACTGGTCTCTGCAATCCGATTCAAGACTCGGGAGCGAAGCGGATAGAGAAATTCGAAGGACCCAAATGGGGAAAACTCTCAAATTCCCGCCGTATCCCGAGAATCCACTTATCAAACAGTACAGTGCAGAGTACTGGATAATGGGGGATCTGATGACCCCTGAAAAGTTGAGATATGGGTCTTTTGCGAAGCGGGTTTTTGATGTGAATGAAGCTGATGTTGTCTTTGTGCCTTTTTTTGCTACGATTAGTGCTGAGATACAGTTGGGTGGGGGCAAAGGGGTGTTTAGGAAGAAGGAGGGGAATGAGGATTATGAGAGGCAGAGGCAGGTGATGGAGTTTGTCAGGGGGACCGAAGCTTGGAAGCGATCTGGTGGGCGAGATCATGTGTTTGTTCTTACTGACCCTGTTGCAATGTGGCATGTCAAGGCTGAGATTGCTCCAGCTATCCTTCTAGTGGTTGATTTTGGAGGATGGTACAAGCTCGACTCAAAAGCATCCAATAACAGCTTGTCAGAAATGATACAACACACACAAGTTTCGTTGCTTAAAGATGTAATTGTGCCATACACCCATCTACTTCCTAGGCTGCATTTATCAGAAAACCAGATACGTCAGACTCTTCTTTACTTTAAAGGGGCTAAACATAGGCACCGGGGAGGCCTGGTACGTGAAAAATTATGGGACTTGTTGGTATATGAGCAAGGTGTTATTATGGAAGAAGGCTTTCCTAATGCCACTGGTAGGGAGCAATCAATAAAAGGGATGAGAACATCAGAGTTCTGCTTGCACCCTGCTGGGGACACCCCTACTTCCTGCCGACTTTTTGATGCGATCCAAAGCCTCTGTATACCTGTCATTGTCAGTGATAACATCGAACTCCCATTTGAAGGGATGGTGGATTATTCAGAATTTTCAGTGTTTGTGGCAGTAAGAGACTCATTGCTGCCAAACTGGCTTGTGAGTCATCTTAGAAGCTTTTCTAAAGGGCAGAGGGACAGATTTCGTCAAAATATGGCACGGGTTCAGCCCATTTTCCAGTATGATAATGGGCACCCAGCTGGTATTGGACCTATCCCTCCTGATGGTGCAGTGAATCACATATGGAAGAAGGTTCACCAGAAGCTGCCCATGATTAAGGAAGCTATTATTCGAGAGAAGAGAAAACCACCAGGTGCATCAGTTCCACTTCGATGCCTTTGTACTTGA 1452 0.4663 MALKATSFTSTLHPSLCSVSSLFLFTLISILSVSLFFLFTTANQSKSISSQSIISQTTPQASIKVYVVDLPRSLNYGLLDTYWSLQSDSRLGSEADREIRRTQMGKTLKFPPYPENPLIKQYSAEYWIMGDLMTPEKLRYGSFAKRVFDVNEADVVFVPFFATISAEIQLGGGKGVFRKKEGNEDYERQRQVMEFVRGTEAWKRSGGRDHVFVLTDPVAMWHVKAEIAPAILLVVDFGGWYKLDSKASNNSLSEMIQHTQVSLLKDVIVPYTHLLPRLHLSENQIRQTLLYFKGAKHRHRGGLVREKLWDLLVYEQGVIMEEGFPNATGREQSIKGMRTSEFCLHPAGDTPTSCRLFDAIQSLCIPVIVSDNIELPFEGMVDYSEFSVFVAVRDSLLPNWLVSHLRSFSKGQRDRFRQNMARVQPIFQYDNGHPAGIGPIPPDGAVNHIWKKVHQKLPMIKEAIIREKRKPPGASVPLRCLCT* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1467 483 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 50 427 IPR004263 GO:0006486|GO:0016757
Vvi18g1467 483 Pfam Exostosin family 61 403 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1467 Vvi-Chr18 18020025 18027899 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1467 - - vvi:100252919 917.916