Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1458 ATGAAGTGGTCTCCTCAAGATGCCATGAAGGCTTACTTGCACACTCTTCAACTGTGTAAAACCCACTTCAATGATCAATATTGCACTCTGGGAACCAGAAATCTCATTCAACCCCATTGGATGGAGTTCATATCAGCTTTGGCAGCAGGAAATCAAGCTAAATTAATGGTGCAAATCACCTCAGACCAAGGCATCACCCCATTAACAATTGCACTTGCAGTGGCAGCAAAGCATACGAAAGCTCGATTCATCTGCATTCTTCATCAACTTCAAGATATAGAGGATTGCAAAGCTCAACTTTCTTGCTATAATCTCAAAGATGTGGTTGAGCTTGTACATGGAAATCCTTGTGAGGTGATCATGGGGTTTAAGAACATTGATTTTGCTGTAATTGACTGTAAATTTGAAGATTACATGAGATTGTTTAAGATTATTGATATGAATCCAAGAGGGTCTATAGTAGTAGTGAGCAATCTTGAGAGAAGAAGAAATGGAGCTAGTTTTGGTGAAGTTATTAAAGGGAGGAAAGGAGTTGAATGTGTGACTCGATCTATTGGAGAAGGAATGGAGTTGACAAGAATTGGATTGAGTTGTAAGTCTCAGAAAAAGAGGTATTAG 618 0.39 MKWSPQDAMKAYLHTLQLCKTHFNDQYCTLGTRNLIQPHWMEFISALAAGNQAKLMVQITSDQGITPLTIALAVAAKHTKARFICILHQLQDIEDCKAQLSCYNLKDVVELVHGNPCEVIMGFKNIDFAVIDCKFEDYMRLFKIIDMNPRGSIVVVSNLERRRNGASFGEVIKGRKGVECVTRSIGEGMELTRIGLSCKSQKKRY* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1458 205 PANTHER DUF1442 FAMILY PROTEIN 1 202 IPR009902 -
Vvi18g1458 205 Pfam Protein of unknown function (DUF1442) 3 203 IPR009902 -
Vvi18g1458 205 Gene3D Vaccinia Virus protein VP39 6 195 IPR029063 -
Vvi18g1458 205 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 26 193 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1458 Vvi-Chr18 17844111 17844998 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1458 - - vvi:104882657 420.239