Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1445 ATGAAGTGGTCTCCTCAACATGCCATGAAAGCTTACCTGCATACACTTCAACTGTCTAAGATCCAATATGGTCAAGATTGCACTCTTGGCACAACAAAACTTATTCAACCTCAATGCATGGAGTTCTTATCAGCTTTGGCAGCAGGAAATCAAGCTAAAGTAATGGTACAAGTTCTCTCAAATGAAGGAGTGAACCCATTAACAATTGCACTAGCTGTGGCTACAAAGTATTGCGAAGGTCGGTTCATTTGTTTTCTTGATCAACAAGAAGACATAGAAAACTGCAAAGCTCAGCTTTCTTGCTATGATCTAGAAGATGTGGTTGAGTTTATGCATGGAAATCCTTGTGAGGTTATCATAAAGTTAAAGAAAATTGATTTTGCTGTTATTGACTGTAAATTTAAAGATCACTTGAGATTGTTTCAAATTATTGATGTGAATCCAAGAGGGTCTGTTGTAGTGGTGACTAATCTTGTGAGGAAAGGAAATGGAGCTGGTTTTGGTGAAGTTGTTAGAGAGAAGAGAGGAGTTGAATGTGTGACTCTATCAATAGGAGAAGGAATGGAACTGACAAGGATTGGAGTGACTTGTAACCATGAGAATAAGAGATTTCATGTAACTTCTGAAAATTGA 633 0.376 MKWSPQHAMKAYLHTLQLSKIQYGQDCTLGTTKLIQPQCMEFLSALAAGNQAKVMVQVLSNEGVNPLTIALAVATKYCEGRFICFLDQQEDIENCKAQLSCYDLEDVVEFMHGNPCEVIIKLKKIDFAVIDCKFKDHLRLFQIIDVNPRGSVVVVTNLVRKGNGAGFGEVVREKRGVECVTLSIGEGMELTRIGVTCNHENKRFHVTSEN* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1445 210 PANTHER DUF1442 FAMILY PROTEIN 1 200 IPR009902 -
Vvi18g1445 210 Gene3D Vaccinia Virus protein VP39 6 194 IPR029063 -
Vvi18g1445 210 Pfam Protein of unknown function (DUF1442) 3 201 IPR009902 -
Vvi18g1445 210 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 31 192 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1445 Vvi-Chr18 17678120 17679059 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1445 - - vvi:104882654 429.483