Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1436 ATGGGAGTTATCAGAGGCAAGCTGAGTGATCTCAGGACCCAAGTGGCTGATTTTGGTGACTTTCCTGTGTTCAAGTCCAATCCTCTTTCTATAGAACTCATGCAGTCCATTTCGCAGACCCTACAAGACGCCGTTTTGGTGGCTTCGAGGTGTAGAGAGTCTGAGTTGTCTCAGGGGAAGCTCAAGACCCAGAGCGATATAGACTCGATTTCCGCGAAGCTGGACCGTTTGATCAAAGATGAACTGTTATGGTTCATCAGTGGCACAACAAATGCAAAGGTCCTACAGGAAAAGGGAATTCATATATGGGATGGCAATGCACCCAGGGACTACCTTGATAGTATTGTTTTGGAAGACAAAGATGAGGGGCCTGTCTCAGATTTTAATGGCTCAGAAGCTGGGAATGAATTTTAA 414 0.4589 MGVIRGKLSDLRTQVADFGDFPVFKSNPLSIELMQSISQTLQDAVLVASRCRESELSQGKLKTQSDIDSISAKLDRLIKDELLWFISGTTNAKVLQEKGIHIWDGNAPRDYLDSIVLEDKDEGPVSDFNGSEAGNEF* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1436 137 Gene3D Thymidylate synthase/dCMP hydroxymethylase domain 72 135 IPR036926 -
Vvi18g1436 137 PANTHER THYMIDYLATE SYNTHASE 1 76 128 IPR045097 GO:0016741
Vvi18g1436 137 Pfam Thymidylate synthase 77 107 IPR023451 -
Vvi18g1436 137 SUPERFAMILY Thymidylate synthase/dCMP hydroxymethylase 76 128 IPR036926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1436 Vvi-Chr18 17514554 17516349 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1436 - - vvi:100256102 145.976