Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1421 ATGGATGCGTCCCCGATCTATCGGCTTCCACAGGACACTCTCCATTACATCTTCTCAACTCTTCCACTCCGTCAGATCATTATCTGTCGATCTGTCTGCAAATTCTTCTACCAAACCCTGACCGCGCCGGCCTTCATGGAACTTATCTCCACCCAACCACCTCTCAACCTGATCGCCCTCCGTCCACCTCACCATCATCACCACCACCACCACCACCACCACAACCGTGACGTGTCGTCTCATAACGCCCTCCACGTGTTTGACCCCAGCTCCAATCAGTGGGTCAGATTCCCCCTTAGTTTCCTTCCCTTTCGCTCGCCGACGCCGGTGGCGTCGTCGCTCGGACTCGTCTATCTTTGGGCCGATTCGCTCAACTCGCTCGAGTCCAACAAGTCGCTCATAGTCTGCAATCCTTTGACTCGGTCCTTCCAAGTCCTACCCCAGCTGGGCTCGGCCTGGTCGCGCCATGGTTCGGTCCTGGTCGGTTCACCCAACCGAGTGTTGGTCCTCACCGAACTGGCCACGCTTTACTTCTCCGGCTCAGACCAGTGGCTCAAATTCTCATCGAATTTGCCGTCTAAGCCTCGAAGTCCAATTCTTGTGTCGGACTCGGTTTTAGCTCTCTGCGATGTTGGGTCGCCGTGGAGGAGTCAGTGGAAGCTATTCGCATGTACCCTCAATCATCTACAGAAGTCGCAGCCATGGACTCGCCTGGATAGGCATGAATGGGGCGATGTTTTCGACATTTTGAGACGGCCCCGTTTGGTGAAAGGGCTTGGGAACCAAATTCTAATGGTTGGTGGATTGAAATCGTCGTTTTCATTGAATGCTGTGTGTTCTACAATTTTGATTTTGAGGTTGGATTTGGACTCACTGGAGTGGGACGAGTTGGGTCGAATGCCCCCGGAAATGTTTAGATGTTTTCAGGAGTCCAGCAAATTTAAGGTGTTTGGTGCGGGGAATAGAGTTTGTTTTTCAGCGAAAAGGGTTGGGAGGTTGGCATTGTGGGATTATTCCACAGAGACGGGGAAGGGAGATTGGAGGTGGATCAATGGGGTGCCTGGAAATGGAGATGGCTTGTTTCGGGGTTTTGTGTTCCAGGCTAGGCTCACTGCATTGCCTTGA 1125 0.5271 MDASPIYRLPQDTLHYIFSTLPLRQIIICRSVCKFFYQTLTAPAFMELISTQPPLNLIALRPPHHHHHHHHHHHNRDVSSHNALHVFDPSSNQWVRFPLSFLPFRSPTPVASSLGLVYLWADSLNSLESNKSLIVCNPLTRSFQVLPQLGSAWSRHGSVLVGSPNRVLVLTELATLYFSGSDQWLKFSSNLPSKPRSPILVSDSVLALCDVGSPWRSQWKLFACTLNHLQKSQPWTRLDRHEWGDVFDILRRPRLVKGLGNQILMVGGLKSSFSLNAVCSTILILRLDLDSLEWDELGRMPPEMFRCFQESSKFKVFGAGNRVCFSAKRVGRLALWDYSTETGKGDWRWINGVPGNGDGLFRGFVFQARLTALP* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1421 374 SMART fbox_2 9 49 IPR001810 GO:0005515
Vvi18g1421 374 Gene3D - 67 354 IPR015915 GO:0005515
Vvi18g1421 374 Gene3D - 2 47 - -
Vvi18g1421 374 ProSiteProfiles F-box domain profile. 3 48 IPR001810 GO:0005515
Vvi18g1421 374 Pfam F-box domain 7 40 IPR001810 GO:0005515
Vvi18g1421 374 PANTHER SKP1-INTERACTING PARTNER 15 1 374 - -
Vvi18g1421 374 SUPERFAMILY Kelch motif 78 325 IPR015915 GO:0005515
Vvi18g1421 374 SUPERFAMILY F-box domain 3 93 IPR036047 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1421 - - vvi:100253011 753.821