Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1411 ATGGGTGGGCTTTGCTCGAGGAGTTCCACTGTAGATAATGCTCCCGGTGGAAGCTTTCCACTTGCTAATGGTCATCTCAGTCATGGTTCAGGAATTGTTTATCAGTCTCGTGGGTTGCCGCCGGAGCTGACTCGCAATTTGACTGCTTCTCCAATAGGGGGAGGTATGGATAATAAGCAATTACGAGAACCCTTATCGGCCCCTGAGATGGAAAGAGTTTCATATGGGGTGAATCCTGATGATATTGATGATGGTATTCCCCGCTTGTCAAGGGCGTTATCACACAAATCTAGATCAACCAAGTCTAAGCAGGTTGCCGTTGCGAAGGTTTCAGAAGTGAGCTCACTTTTGGGCAGGGCTGGTACTGCTGGGCTTGGGAAGGCAGTTGAAGTTTTGGACACACTTGGTAGTAGCATGACAAATTTGCATCTTAGCAGTGGTTTTGTTTCAGGAGTGACAACAAAAGGGAATAAAATTACAATTTTGGCTTTTGAGGTTGCAAACACTATTGTTAAGGGCTCCAACCTCATGCAATCCCTTTCAAAGGAGAACATTGCACATTTAAAAGAGGTGGTGCTTCTGTCAGAAGGTGTGCAACATTTAATATCAAAAGATATGGAGGAACTCCTCAGAATTGCTGCAGCTGATAAAAGGGAAGAACTGAAAATTTTTTCTGGAGAAGTGGTCCGTTTTGGGAATCGATGTAAAGATCCTCAGTGGCACAACTTGGACCGTTACTTTGAGAAGTTGGGTTCAGAGCTCACACCACAGAAGCAATTGAAAGAAGAAGCAGATACAGTGATGCAGCAATTGATGACTTTGGTTCAATATACAGCTGAATTATATCATGAGTTGCATGCCTTGGACAGATTTGAACAAGATTATCGGCGCAAGCTTCAGGAAGAGGATAACTCGAATGCAGCTCAACGAGGGGATAGCCTTGCACTCTTAAGGGCAGAGTTAAAGAGTCAAAGGAAGCATGTAAGAAGCTTGAAGAAGAAATCACTCTGGTCAAAGATATTGGAAGAGGTAATGGAGAAGCTTGTAGACATTGTGCATTTCTTACATTTGGAGATACATGATGCCTTTGCTACTGCTGATGGTGATAAACCAATCAAAGGTTCTACAAACAACCATAAAAAGTTGGGCAATGCTGGTCTTGCATTACATTATGCGAATATTATCACTCAAATTGATACTCTTGTGTCCCGATCAAGTTCTGTGCCTCCAAATATGAGGGATGCCTTATACCAAGGACTGCCGCCTAGTATAAAGTCAGCATTACGCAACAGACTACAATCCTTTCAGCTTAAGGAAGAGCTTACCATTCCACAAATCAAAGCTGAAATGGAGAAAACTTTGCATTGGCTTGTGCCTATTGCCGCCAACACAACCAAAGCTCATCATGGCTTTGGTTGGGTTGGCGAATGGGCCAATACCGGGTCTGAGGTTAACAGGAAGCCTGCTGGCCAGACAGACTTAATCCGGATTGAGACACTCCACCATGCAGATAAGGAGAAAACTGAAGCTTATATTCTTGAATTGGTTGTATGGCTTCATCATCTTGTCAGCCAATCGAGAACTACCATTAATGGTGGAATCAGATCTCCTGTTAAGTCCCCAATTCGCTCCCCAAATCAGAAGTCAATTCAGCTGTCTACCCACAAGCCCAATTCTCCGTCTCCCATGCTGACAATAGAAGACCAAGAGATGCTTCGCGATGTTAGTAAGAGGAAACTCACACCTGGAATAAGCAAGTCTCAGGAATTTGACACTGCAAAAACGAGGTTAAGCAAACACCACAGACTGAGTAAAAGTAGTAGTCACTCCCCAACAAGTGAAACCAAGAAGGAGCTCTTCTCCATTAGGAGGCCATCCTCGGTTCCTGTCATTGACTTTGATATTGACCGGATCAAAGCCTTGGACGTCATTGATCGAGTAGATACAATTCGAAGTATATGA 1962 0.4373 MGGLCSRSSTVDNAPGGSFPLANGHLSHGSGIVYQSRGLPPELTRNLTASPIGGGMDNKQLREPLSAPEMERVSYGVNPDDIDDGIPRLSRALSHKSRSTKSKQVAVAKVSEVSSLLGRAGTAGLGKAVEVLDTLGSSMTNLHLSSGFVSGVTTKGNKITILAFEVANTIVKGSNLMQSLSKENIAHLKEVVLLSEGVQHLISKDMEELLRIAAADKREELKIFSGEVVRFGNRCKDPQWHNLDRYFEKLGSELTPQKQLKEEADTVMQQLMTLVQYTAELYHELHALDRFEQDYRRKLQEEDNSNAAQRGDSLALLRAELKSQRKHVRSLKKKSLWSKILEEVMEKLVDIVHFLHLEIHDAFATADGDKPIKGSTNNHKKLGNAGLALHYANIITQIDTLVSRSSSVPPNMRDALYQGLPPSIKSALRNRLQSFQLKEELTIPQIKAEMEKTLHWLVPIAANTTKAHHGFGWVGEWANTGSEVNRKPAGQTDLIRIETLHHADKEKTEAYILELVVWLHHLVSQSRTTINGGIRSPVKSPIRSPNQKSIQLSTHKPNSPSPMLTIEDQEMLRDVSKRKLTPGISKSQEFDTAKTRLSKHHRLSKSSSHSPTSETKKELFSIRRPSSVPVIDFDIDRIKALDVIDRVDTIRSI* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1411 653 Pfam Domain of unknown function (DUF3475) 161 217 IPR021864 GO:0045927
Vvi18g1411 653 Pfam Protein of unknown function (DUF668) 382 466 IPR007700 GO:0045927
Vvi18g1411 653 Coils Coil 314 334 - -
Vvi18g1411 653 MobiDBLite consensus disorder prediction 534 564 - -
Vvi18g1411 653 PANTHER OS01G0873900 PROTEIN 1 649 IPR045021 GO:0045927
Vvi18g1411 653 MobiDBLite consensus disorder prediction 579 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1411 Vvi-Chr18 15967755 15986135 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1411 - - vvi:100263351 1246.11