Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1406 ATGGATGCCTTCCATCCAACACCAGCCTCACTCTCTCCCTACAAGCTTCTTTTCAGGGCTCTCTCTTCCATACCCATTTCCCATTATTTCTTGGCTTCCCTCTTCTGCTCTCTCATTTTTCTCTATCATTTTCTAGAATTCCATTTCCTTGAGGATGTCTTTTCTGGGTTGAGAGGGAGTCCTGTTTCTTTGACCTTCAATTCCCATTCTCAGATCTATGAAGGGGTTGTTTCCAAGTGTAAGATTCTTCATGGAAGGTATTTGGCAACTCCTTGGCTTTCAAGTCCTCATTTTCAGACTGCTTTTCTGAATTTCTTTGGGAGGCCTCCTGTTGTCAACTACAGAAGACAGATATTTCATGCTTCTGATGGTGGAAGTCTAGCTTTGGATTGGCTACTGCCTTCTGATGTTCTGAGAGGTGCTTTTCATGCGAATAATGCCATTTCTAAAGATGACACAACGCCTATTGTAGTAGTAATTCCTGGCTTAACAAGTGATTCTACTTCTGCTTATATCAAGCATTTTGCCTTAAATATGGTAAAACGTGGATGGAATATTGTTGTTAGTAACCATCGAGGTCTTGGTGGTATTTCAATTACTTCTGATTGCTTTTATAATGCTGGATGGACAGAGGACATACGGGAAGTCATTGCTCATCTCCATCACGAATACCCAGTGGCTCCCCTCTTTGCTGTTGGAACTAGCATTGGTGCAAACATTCTGGTAAAATATCTTGGTGAGGATGGGGAGAATATTCCTGTTGCTGGGGCTGTAGCTATTTGCAATCCTTGGGACTTACTGATTGGTGACCGGTTCATATCCCGTAGGCTTCTGCAGAAGTTTTATGACATGGCTCTTGCCAGTGGCCTTCAAGGTTATGCACAATTACATCAGCCTCGCTATTCTCGCCTTGCTGATTGGGAAGGCATTAAAAAGTCACGTTCCATTCGGGATTTTGACACCTATGCCACCTGTCTTGTTGGGAAATTTGAGACTGCGGATACGTACTATAGACGTTGTAGTAGTGCTAGTTTTGTTGGAAATGTGGCAGTGCCACTACTCTGCGTCAGTGCTTTGGATGATCCAGTCTGCACTAGGGAAGCCATTCCTTGGGATGAATGCAGGGCAAATAAAAATGTTATCCTAGCTACCCCACAGCATGGAGGACATCTGGCATTTTTTGAAGGAATAGCTGCGACGAGCCTGTGGTGGGTAAGGGCTGTCGATGAATTTCTGAGCGTTCTACACTCAAGCCCATTTATGCATAAACAAAAGAAGATACTGAATTCTAGCCCACATTCTTCATTGGAATCTGCAATTGATCAGGGCCCTTATGTGAATTTTGCAGAAGATGGAATGGTGGCTGCGATGGGCAATGAGCAAACAAGCACTGTTGTAGGACCCTTGTCCGAAGGACAGAATATTCATGATAAATCAAGTGATAATGAAATGGCTTCAGACAGTGAACAAGATGAGCGCATGACAACAGAAAATTCTGCTCTTGCACCCAACATTGCCCAAACTTCCAAACTAGCAGCCAAACCTAGTTCTATCAGAAAATGCTTAGAGAAGCTTTCTCAGCACAATAGAATATCAATGTGGTTGATGGCTTACATTGCTATCACTACAAGTTGGCCTTTGGTAGGCCCAGCTCTTCAATTTGTCTTCAAAAACAAGTTCAAAAGTGTCTTACCTGCAGCATTACATGGAAGATAG 1716 0.4312 MDAFHPTPASLSPYKLLFRALSSIPISHYFLASLFCSLIFLYHFLEFHFLEDVFSGLRGSPVSLTFNSHSQIYEGVVSKCKILHGRYLATPWLSSPHFQTAFLNFFGRPPVVNYRRQIFHASDGGSLALDWLLPSDVLRGAFHANNAISKDDTTPIVVVIPGLTSDSTSAYIKHFALNMVKRGWNIVVSNHRGLGGISITSDCFYNAGWTEDIREVIAHLHHEYPVAPLFAVGTSIGANILVKYLGEDGENIPVAGAVAICNPWDLLIGDRFISRRLLQKFYDMALASGLQGYAQLHQPRYSRLADWEGIKKSRSIRDFDTYATCLVGKFETADTYYRRCSSASFVGNVAVPLLCVSALDDPVCTREAIPWDECRANKNVILATPQHGGHLAFFEGIAATSLWWVRAVDEFLSVLHSSPFMHKQKKILNSSPHSSLESAIDQGPYVNFAEDGMVAAMGNEQTSTVVGPLSEGQNIHDKSSDNEMASDSEQDERMTTENSALAPNIAQTSKLAAKPSSIRKCLEKLSQHNRISMWLMAYIAITTSWPLVGPALQFVFKNKFKSVLPAALHGR* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1406 571 MobiDBLite consensus disorder prediction 476 494 - -
Vvi18g1406 571 SUPERFAMILY alpha/beta-Hydrolases 96 412 IPR029058 -
Vvi18g1406 571 MobiDBLite consensus disorder prediction 468 506 - -
Vvi18g1406 571 Gene3D alpha/beta hydrolase 111 413 IPR029058 -
Vvi18g1406 571 FunFam Embryogenesis-associated protein EMB8 141 412 - -
Vvi18g1406 571 PANTHER ABHYDROLASE DOMAIN-CONTAINING PROTEIN 22 427 - -
Vvi18g1406 571 Pfam alpha/beta hydrolase fold 155 396 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1406 Vvi-Chr18 15792757 15844126 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1406 112 360 Miscellaneous Gene Families AT2G03140 31.518 2.66e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1406 - - vvi:100247959 1154.81