Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1369 ATGGCTGCCTATGCAAGTGCACTAAACCATGTTGCTCTGGCGGGACCGACTTTATTTGGACAAGTGATCAACAATGTAGTTGAAATTGTTGGCCAATCCCTCTGCTATAACAACTACAAATATTTTGTTTTGCTTATCATAAAGGATGGAGTACTTACAGATCTCCAAGAAACAAAATATGCTTTGGTCAGGGCATCTGATTTTCCCTTATCGATTCTGATAGTTGGAGTGGGAAGAGCAGATTTTAAAAAAATGGAGATCCTTGATGCTGATAACGGCTGTCAATTATAG 291 0.3918 MAAYASALNHVALAGPTLFGQVINNVVEIVGQSLCYNNYKYFVLLIIKDGVLTDLQETKYALVRASDFPLSILIVGVGRADFKKMEILDADNGCQL* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1369 96 PANTHER COPINE 1 93 IPR045052 GO:0005544
Vvi18g1369 96 Pfam Copine 1 92 IPR010734 -
Vvi18g1369 96 SUPERFAMILY vWA-like 7 93 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1369 Vvi-Chr18 13920416 13920706 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1369 - - vvi:100250282 162.925