Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1368 ATGAAACGACAAATTGAAGCACATTCAGATCTTTCCAACAATTCATTTTATGGCCAACTTCAACTGGATTTTAGCCATCTGTCACTCCTTCAGAATATTAACCTTGCAAGAAACTCCATTAATGGTAGAATTCCAGTTGGTCTTTCTCATTGTTATAACCTTGAGGAGATTTATTTTGAGCACAACCAACTTATTGGGAACCTTCCATCTGAACTTGGAGATCTGCCGAGACTCAGAATTCTTGACGTTGCAGCGAATAACCTTACAGGTGGAAAGATCCCTTATTCCATCTACAACATCTCTTCTTTGATCTACTTATCTGTAGCAGAAAATATGCTTGTTGGAGAACTACCAACTGATATGGGCCTTGCACTTCCAAACCTGGCAGAAGTCTACCTAGCACATAACCAGCTGGAAGGGCCAATTCCCAGTTCTTTCTCTAATGCTTCACAAATTCAAGTCCTAGACTTTTCTTCAAACCACTTTCAAGGGCCAGTTCCTCTACTTGGTAACATGAATAATCTTAGACTCCTACATCTTGGCCTGAATAATCTCTCTTCCACCACCAAGCTTAATCTTCAGGTATTTAATTCACTAGCAAACTCTACACATATTGGAGAGTGCAAGAATTTAAAGAGACTGGGTCTAAGACAGAACAGGGTCAATGGTAGCATACCCAAGGAGATTTTCAGACTTCTTGATATAATCGAGATATATTTGGCGCATAATGAACTAAGTGGTTCTCTGCCCGCCCTAGTTGAAAGTTTGGAACACCTTGAGAGCATGGATCTTTCTTCCAACAGTCTGACTGGACAAATCCCCGAAGAGTTACAGGATCTTTTGTATTTGCAGATCTTAAATTTGTCTTTCAATGACTTGGGAGGACCAGTTCCAAGAAAAGAGTGTAGTTTAGGTAGCAGAATTTCAACAAGTAGGGATGTCTACAGCTTTGGAATTTTGCTGCTTGAGATATTCACAGCAAAGAAACCCACTGATGACATGTTTCAGGAAGGTTTAAATCAGAATAAGTTGGCATCTGCACTGCTCATAAATCAATTTTTAGATATGGCTGACAAACGGCTTTTTAACGATGATGCTTGTATAGACTATAGCATCTTCACTAGTTCTTCTGGTTGCATTAACAGCATCGAGTGTATTACTGCCATAATACATGTTGGTTTGTCGTGTGCTGCTCATTCAACCACAGATCGTTCAACCATGAGAGAAGCATTGACAAAGTTGCATGATATTAAAGCTTTTCTACTGGATTTATGA 1275 0.3945 MKRQIEAHSDLSNNSFYGQLQLDFSHLSLLQNINLARNSINGRIPVGLSHCYNLEEIYFEHNQLIGNLPSELGDLPRLRILDVAANNLTGGKIPYSIYNISSLIYLSVAENMLVGELPTDMGLALPNLAEVYLAHNQLEGPIPSSFSNASQIQVLDFSSNHFQGPVPLLGNMNNLRLLHLGLNNLSSTTKLNLQVFNSLANSTHIGECKNLKRLGLRQNRVNGSIPKEIFRLLDIIEIYLAHNELSGSLPALVESLEHLESMDLSSNSLTGQIPEELQDLLYLQILNLSFNDLGGPVPRKECSLGSRISTSRDVYSFGILLLEIFTAKKPTDDMFQEGLNQNKLASALLINQFLDMADKRLFNDDACIDYSIFTSSSGCINSIECITAIIHVGLSCAAHSTTDRSTMREALTKLHDIKAFLLDL* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1368 424 Gene3D Ribonuclease Inhibitor 200 303 IPR032675 -
Vvi18g1368 424 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 4 175 - -
Vvi18g1368 424 Pfam Leucine Rich Repeat 258 279 IPR001611 GO:0005515
Vvi18g1368 424 FunFam - 304 421 - -
Vvi18g1368 424 Gene3D Ribonuclease Inhibitor 4 199 IPR032675 -
Vvi18g1368 424 Gene3D Transferase(Phosphotransferase) domain 1 304 421 - -
Vvi18g1368 424 PANTHER DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 78 348 - -
Vvi18g1368 424 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 202 297 - -
Vvi18g1368 424 SUPERFAMILY L domain-like 10 298 - -
Vvi18g1368 424 SUPERFAMILY Protein kinase-like (PK-like) 301 412 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1368 Vvi-Chr18 13901947 13916358 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1368 301 418 Receptor kinase-like Gene Family AT3G47570 30.508 4.29e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1368 - K13420 vvi:100260240 243.817