Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1360 ATGGGTGCTTCAGCTGCCCAGGGAGATAAGTACAGGTCTTACTTGTATGGAGAAGGAGAGGAAAACACTGAATGGAGATATGGGGCTGCTCCCAATTATGACGTTGTAAACAAGCTCTTTGAAGAAGGCAGAACTAAGATATGGCCTCCTGGGTCACTAGAGGAGCAGGTGCAGAACATGGTGAAGACTTGGGAGATGGAGATGTTCCATAAAGTGAAGATGGAAGACTTTAAGTCAGTTGATCCGAACAAGTATACTTTCAGCCTCAATGGAAGGAAGCCGCTATCGCTGGAAGAGAAGAGAAAGCTTGGAGGAGGCTATAATCCACTGCTGCAAACCTCCTTGCCAGAGAAGTTCCGTGCTTATAATCCAGATGGTGAAACAGCGATTTCGTCTCACCTGGCTTTCACAACAGCGTTTCCTCGTGGTTTTGCACTGGAGATTCTGCAGGTTTACTCTGGACCACCAGTGATCCTATACAAGTTCAGGCACTGGGGTTATATGGAGGGTCCTTTTAAAGGGCATGCACCCACTGGAGAACGGATAGAAGTCTTTGGGATGGCCATTTTTGAGCAAGATGAGCATTCAAAAATTGTGAAGGTGGAGTTCTTTTACGACCGCGGAGAACTGCTTGGAGGCCTTCTGAAGGCTGTCTCTGATGGTTCCATGGATGCCACTCCCTCAAACTGCCCTGTCCTGAGGAGCACTGGGTAG 714 0.4818 MGASAAQGDKYRSYLYGEGEENTEWRYGAAPNYDVVNKLFEEGRTKIWPPGSLEEQVQNMVKTWEMEMFHKVKMEDFKSVDPNKYTFSLNGRKPLSLEEKRKLGGGYNPLLQTSLPEKFRAYNPDGETAISSHLAFTTAFPRGFALEILQVYSGPPVILYKFRHWGYMEGPFKGHAPTGERIEVFGMAIFEQDEHSKIVKVEFFYDRGELLGGLLKAVSDGSMDATPSNCPVLRSTG* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1360 237 Gene3D - 111 215 - -
Vvi18g1360 237 PANTHER PATHOGENESIS-RELATED FAMILY PROTEIN 5 235 - -
Vvi18g1360 237 SUPERFAMILY NTF2-like 129 211 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1360 Vvi-Chr18 13810684 13811587 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1360 - - vvi:100259201 493.812