Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1359 ATGGCATCTTCGGTTGTTGAGGGTGATAAGTACCGTTCCTACTTGAGTGGGGACGATGAGAAGAATACTGAATGGAGATATGGTGCTCCTCCTAACTATGATGTTGTGAACAAACTCTTTGAAGAGGGCAGAACTAAGATATGGCCTGCTGGGTCACTGGAAGAAAAAGTGCAGAATCTTGTGAAGACATGGGAAATGGAGATTTTCCATAAGACCAACCCGAATGAATACAAATCACTTGATCCCAAGAAGTATACTTTCAGCCTTAATGGAAGGAAACCGATAAATTTCGGGCAACTCCGCCAACTTGGAGGGGGCTATAATCCATTGATGCTGACCTCCTTGCCTGAGAAGCTCCGGGTCTATAACCCAGCCGATGAAACCGCACAGACATCTCACCTGGCCTTCACCACCGCCTTCCCCCGAGGTTTTGCACTGGAGATTCTCCATGTTTATACAGGGCCACCAGTGATTGTGTACAAATTTAGGCACTGGGGCTTCGTGGAGGGTCCTTTTAAAGGACATGCACCCACTGGAGAAATGGTAGAATTCTTTGGGATGGCAGTCTTTGAGTTAGATGAACATATGAAAATTGTGAAGGTGGAGTTCTTTTACGACCGTGGGGAACTGCTTGGAGGTCTTCTAAAGGGTACTGCCATGGATGGTCCTGCCATTGAGGCATCTTCAAGCTGCCCTGTCCTGAGGAGCACAGGGTAG 717 0.4756 MASSVVEGDKYRSYLSGDDEKNTEWRYGAPPNYDVVNKLFEEGRTKIWPAGSLEEKVQNLVKTWEMEIFHKTNPNEYKSLDPKKYTFSLNGRKPINFGQLRQLGGGYNPLMLTSLPEKLRVYNPADETAQTSHLAFTTAFPRGFALEILHVYTGPPVIVYKFRHWGFVEGPFKGHAPTGEMVEFFGMAVFELDEHMKIVKVEFFYDRGELLGGLLKGTAMDGPAIEASSSCPVLRSTG* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1359 238 SUPERFAMILY NTF2-like 132 211 IPR032710 -
Vvi18g1359 238 PANTHER PATHOGENESIS-RELATED FAMILY PROTEIN 5 236 - -
Vvi18g1359 238 Gene3D - 108 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1359 Vvi-Chr18 13805509 13806500 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1359 - - vvi:100254084 496.508