Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1358 ATGGCATCTTCGGTTGGTGAGGGTGACAAATATCGGTATCATTTGGATGGAGAGGAGGAGAACACTGAATGGAGATATGGGGCTCCTCCTAACTATGAGGTTGTGCACAAGCTCTTTGAAGAAGGCAGGACTAAGATATGGCCTGCTGGGTCACTCGAAGAAAAAGTGCAGAATCTTGTGAAGACATGGGAAATGGAGATGTTCCATAAGGTCAATTTGGATGACTACAAAACGACTGATCCCAAAAAATATACTTTCAGCCTGAATGGGAGGGAACCTATGAACTATGAAGAGATCATGAAAAATGGAGGCTATAATCCACTGCTACAAACCTCCTTGCCTGAGAAGCTCCGGGTCTATAACCCAGCTGATGAAACTGCACAGTCAGCTCACCTGGCTTTCACCACAACCTTTCCACGAGGTTTTGCACTGGAGATTCTCCATGTCTATTCTGGGCCACCGGTGATTGTCTACAAATTTAGGCACTGGGGCTTCATGGAGGGTCCTTTTAAAGGACATGCACCCACTGGAGAAATGGTAGAATTCTTTGGGATGGCAGTCTTTGAGTTGGATGAACATATGAAAATTGTTAAGGTGGAGTTCTTTTACGACTCTGGTGAACTGCTTGGAGGTCTTGTGAAGGGTCCTACCCTGGATAGCACTACATATGGGGCGTCAGCAGGCTGCCCTGTTCTGAGGAACACAGGGTAG 711 0.4655 MASSVGEGDKYRYHLDGEEENTEWRYGAPPNYEVVHKLFEEGRTKIWPAGSLEEKVQNLVKTWEMEMFHKVNLDDYKTTDPKKYTFSLNGREPMNYEEIMKNGGYNPLLQTSLPEKLRVYNPADETAQSAHLAFTTTFPRGFALEILHVYSGPPVIVYKFRHWGFMEGPFKGHAPTGEMVEFFGMAVFELDEHMKIVKVEFFYDSGELLGGLVKGPTLDSTTYGASAGCPVLRNTG* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1358 236 Gene3D - 51 213 - -
Vvi18g1358 236 PANTHER PATHOGENESIS-RELATED FAMILY PROTEIN 4 233 - -
Vvi18g1358 236 SUPERFAMILY NTF2-like 128 209 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1358 Vvi-Chr18 13803822 13804796 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1358 - - vvi:100248978 498.434