Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1357 ATGGAAAGTCAACGGCTAATTGATTGCAGCACACCACTTTTGGAAGAAGCGTATACTTATGGGATTGTAGAACATCCTTTTCCATTAAATTTCTTTCTAAGGGAGTGGTACCTTGGTCGGGACTTCTACCAAGCTGTTAAAGTTGGCATTGTTCAATATATGATACTGAAGATGATCTGTGCACTATTGGCAATCTTTCTTGAATTTTTGGGGGTTTATGGAGAAGGGAAATTTGAGTGGAGATATGGCTATCCTTACTTGGCAGTTGTTCTTAATTTCAGTCAAACCTGGGCCTTGTATTGCCTTGTACAGTTCTACACTGTCACTAAGGATAAGCTGGAACCTATTAAACCTTTGGCCAAGTTTCTTGTATTCAAGTCAATTGTATTCCTGACATGGTGGCAAGGTGTTGCTGTTGCATTTCTTTTCTCAATAGGTGCCTTTAAAGGATCTTTGGCTCAGGAGTTGAAAACACGCATACAAGACTATATCATCTGTATTGAGATGGGTGTTGCTGCTGTGGTGCATCTTTATGTCTTTCCTGCAGTACCTTATCAACGTGGAGAAAGATGTGTCCGTAATGTAGCTGTAATGGCTGATTATGCATCATTGGATACTCCTCCAGATCCTGAGGAGGTTAGAGACTGCGAGAGATCTACAAGAATACGTTTGGCTCGTCATGATGAGAGAGAAAAGCGTCTGAATTTCCCCCAGAGTGTTCGTGATGTGGTCCTTGGAAGTGGTGAAATTATTGTTGATGACATGAAGTTCACAGTTTCACACGTAGTTGAACCGGTTGAAAGGGGAATTGCAAAAATAAATAAGACTTTCCATCAGATATCTGAAAATGTGAAACGGCATGAGGAGCGAAAGAGGAATGCTAAGGATGATAGTTATGTTATACCCTTGAATTCGTGGACAAGGGAATTTTCTGAAGTCCATGATAATCTTGTTGAAGGGAGCATTAGTGATAGTGGATTGTCCAGTGGGAAGAGACAACATTACCAAACCAAAGCTACAGCTTCTCGGAGATCTGCCAGATGA 1044 0.4109 MESQRLIDCSTPLLEEAYTYGIVEHPFPLNFFLREWYLGRDFYQAVKVGIVQYMILKMICALLAIFLEFLGVYGEGKFEWRYGYPYLAVVLNFSQTWALYCLVQFYTVTKDKLEPIKPLAKFLVFKSIVFLTWWQGVAVAFLFSIGAFKGSLAQELKTRIQDYIICIEMGVAAVVHLYVFPAVPYQRGERCVRNVAVMADYASLDTPPDPEEVRDCERSTRIRLARHDEREKRLNFPQSVRDVVLGSGEIIVDDMKFTVSHVVEPVERGIAKINKTFHQISENVKRHEERKRNAKDDSYVIPLNSWTREFSEVHDNLVEGSISDSGLSSGKRQHYQTKATASRRSAR* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1357 347 SMART Solute_trans_a_2 3 185 IPR005178 -
Vvi18g1357 347 Pfam Organic solute transporter Ostalpha 43 185 IPR005178 -
Vvi18g1357 347 MobiDBLite consensus disorder prediction 322 347 - -
Vvi18g1357 347 Coils Coil 270 297 - -
Vvi18g1357 347 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 17 293 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1357 Vvi-Chr18 13795769 13799489 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1357 - - vvi:100266072 703.36