Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1347 ATGCAACCATATTTGCCACCGCTCTCCCAAGTCTCTCTAATTCCTTCCTCAAGCTCCCACAACCCACCAGCTAAGTTGATAGATACTGTGAGTAGATTGAATTGGATTTCAATGGGGTATTCCGGGCTTTTTATCACGAAGGTTGCCAGTTTTGGAAAAAGATTACTGAAGGATCATTTTAAGAGCTGGGTTTTTCAATCTTTGAATGGACTCATTGTGCTTGGATCATTAGTATCCTTTTTTGTGGCTGCCGGGTGTGCGTATCTATATGTGTTTCCCACTTTTCACTCTGTGATTCAGAATTATGGGATTTCCAAGTCCTCCAGTGAATGCAATGTTTTTGAAGGAAGATGGATCCGGGATGAGAGTTACCCTCTATACAATGCATCGGACTGTCCTTTTGCTGAACGTGGATTTAATTGCTTGGCTAATGGGCGGAAAGATCAGGGTTATTTAAAATGGCGGTGGAAACCCAAGAATTGTGAGATTCCGAGGTTTAGAGTGCATGGAGTTCTTGAAAAGCTTCGAGGGAAGCGGGTTGTTTTCATTGGTGATTCGATGAGTAGAACACAGTGGGAATCCCTGATATGTTTGCTTATGACTGGTGTGGAGGATAAGAGGAGTGTTTATGAGATTAATGGGAATAGTATCACGAAACGGATTAGGTATTTGGGTGTGCGGTTTAGCTCGTTTAATTTTAGTGTTGAGTTCTATCGTTCTGTTTTCCTGGTGCAGCCTGGCCTGGCCCCAAAACATGGACCAAAGAGGGCTAAATCATCGCTACATCTGGACAAGATGGATGAAATTAGTAAAGAGTGGATTGACTCTGATATTCTGATTTTTAATACAGGGCACTGGTGGACGCGTTCCAAGCTTTTTGAAATGGGCTGCTACTTCCAGGTGGGTGGGGCACTGAAGCTTGGAATGTCAATTCCAACTGCCTTCAGAACAGCATTAAACACTTGGGCTTCATGGATTGAAACTGCAATCAACACAAACAGAACACGTGTATTCTTTCGTTCTTTTGAATCTTCCCACTGGAGTGGTCGAAGACAACAGTTTTGCAAAGTGACTAGAAACCCCTTGTCAAAACCTAAAGGAAGGGGCCGGAGTCCATTTTCAGACATCATAATGAAGGTGGTGGAGAATATGGCTGTTCCTGCGACAGTTCTGCATGTTACCCCCATGGTGGCATTCCGTAGTGATGCGCACGTTGGTACTAATAGTGACACTCCATTGGTGCCTGATTGTAGCCATTGGTGTCTACCTGGGGTGCCTGATATGTGGAACGAAATTCTCTTATCATACCTACTTTCCAGGAACGAAGTTTCTTTTCAATGA 1341 0.437 MQPYLPPLSQVSLIPSSSSHNPPAKLIDTVSRLNWISMGYSGLFITKVASFGKRLLKDHFKSWVFQSLNGLIVLGSLVSFFVAAGCAYLYVFPTFHSVIQNYGISKSSSECNVFEGRWIRDESYPLYNASDCPFAERGFNCLANGRKDQGYLKWRWKPKNCEIPRFRVHGVLEKLRGKRVVFIGDSMSRTQWESLICLLMTGVEDKRSVYEINGNSITKRIRYLGVRFSSFNFSVEFYRSVFLVQPGLAPKHGPKRAKSSLHLDKMDEISKEWIDSDILIFNTGHWWTRSKLFEMGCYFQVGGALKLGMSIPTAFRTALNTWASWIETAINTNRTRVFFRSFESSHWSGRRQQFCKVTRNPLSKPKGRGRSPFSDIIMKVVENMAVPATVLHVTPMVAFRSDAHVGTNSDTPLVPDCSHWCLPGVPDMWNEILLSYLLSRNEVSFQ* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1347 446 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 83 434 IPR029962 GO:0016413
Vvi18g1347 446 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 163 435 IPR026057 GO:0016740
Vvi18g1347 446 Pfam PMR5 N terminal Domain 110 162 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1347 Vvi-Chr18 13650264 13655312 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1347 - - vvi:100252383 871.692