Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1335 ATGGGAACATCCATATTCACTAGCTGTAGCTTTTCCTGGAGAAATCATCATCATATCATTCCTTCTCACCGTTTTCTTTCTCATTCTTCGCCGGATAAGGGTTTATCGGTAGCAAAAGCTGCTGTAGATACAAGACAGAATGGTTGTGTTGAATTTGTTGATGAAGAAACTGAGAAGTTCTCTGGGTTTTTGAAGAGAAGATCCGCTATTGTTTCTGGGGTCTCTTTGATTTCTTCCGCAGTTTTGGGTTTTCCAAGAGAGGGATTGGCAGTTGTGAAACAAGGCCTCCTAGCAGGAAGGGTACCTGGTCTATCTGAGCCAGATGAACAAGGTTGGAGGACATACCGGAGACCGGATGAAAAATCTGGAGGCCATGGTGTTGGATGGAGTCCGATTATTCCTTACATCTTTTCAGTCCCTTCTGGTTGGGAAGAGGTTCCTGTATCAATTGCAGATCTAGGTGGGACAGAGATTGATTTGAGGTTTGCCAATTCTAAGGAAGGGCGTTTATTTGTCATTGTTGCCCCAGTTCTCAGATTTGCAGACAATCTTGGGGATGATGCTAAAGTTGAAAAAATAGGACCTCCAGAGAAAGTGATCGCTGCTTTTGGACCAGAAGTGATTGGGGAGAATGTAGAAGGAAAAGTCTTGAGCATGGGAGTAGTGGAGCACTCAGGAAGAACATATTACCAGTTCGAATTGGAGCCACCTCATGTTCTTATCACAGCAACTGCAGCGGGAAATCGCCTTTACTTGTTCAGTGTAACTGCAAGTGGTCTTCAATGGAAGAGACATTACAAGGATTTAAAAAAGATAGCTGACTCTTTCCGTGTTGTCTAG 840 0.4369 MGTSIFTSCSFSWRNHHHIIPSHRFLSHSSPDKGLSVAKAAVDTRQNGCVEFVDEETEKFSGFLKRRSAIVSGVSLISSAVLGFPREGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYIFSVPSGWEEVPVSIADLGGTEIDLRFANSKEGRLFVIVAPVLRFADNLGDDAKVEKIGPPEKVIAAFGPEVIGENVEGKVLSMGVVEHSGRTYYQFELEPPHVLITATAAGNRLYLFSVTASGLQWKRHYKDLKKIADSFRVV* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1335 279 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 132 279 - -
Vvi18g1335 279 Pfam PsbP 135 278 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Vvi18g1335 279 SUPERFAMILY Mog1p/PsbP-like 127 278 IPR016123 -
Vvi18g1335 279 PANTHER - 27 278 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1335 - - vvi:100252244 564.688