Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi18g1332 | ATGGATGCTCATCATGCTCTTCATTTCACGTTTGGGATTTTTGGAAATGCTACCGCTCTGTTCCTCTTCTTGGCTCCACTGATTACTTTCAAGAGAATCATTAAAAGCAAATCTACGGAGCAGTTCTCAGGAATACCGTACGTCATGACCTTGCTCAACTGCCTTCTCTCTGCTTGGTATGGCCTTCCATTTGTATCAAAGAACAACATACTGGTGTCCACCATCAATGGCACTGGAGCAGCCATTGAAATCATATATGTGCTCATCTTCATCGCATACTCAATCAAGAAGGAGAGGGCTAAGATACTAGGCCTATTCATCTTCGTGCTTTCTGTGTTTGGGGTCGTCGTCTTCGTCTCCCTCTTCGCCTTACATGGCCATAGCAGGAAGCTCTTCTGTGGTTTGGCCGCCACCATTTTCTCCATCATCATGTATGCATCACCTCTGTCCATCATGAGAATGGTGATCAAAACAAAGAGTGTAGAGTACATGCCCTTCTTCTTATCACTGTTCGTGTTCCTCTGCGGTACTTCCTGGTTTGTCTTTGGCCTACTCGGTAAAGACCCCTTTGTCGCGGTGCCGAACGGCTTTGGGTGCGGCCTAGGGGCGATGCAGCTGATACTGTACGCCATCTACTGCAAAAAAGGCAAGTCCAAGAATCTGGCCGCTGCAGACAAGCCGGTGGACATGGAGCTTGGGAAGCCCCAGCAAGAGAAGCAATCCAGGGCGCAAAATGGAAACGTGTAG | 747 | 0.4833 | MDAHHALHFTFGIFGNATALFLFLAPLITFKRIIKSKSTEQFSGIPYVMTLLNCLLSAWYGLPFVSKNNILVSTINGTGAAIEIIYVLIFIAYSIKKERAKILGLFIFVLSVFGVVVFVSLFALHGHSRKLFCGLAATIFSIIMYASPLSIMRMVIKTKSVEYMPFFLSLFVFLCGTSWFVFGLLGKDPFVAVPNGFGCGLGAMQLILYAIYCKKGKSKNLAAADKPVDMELGKPQQEKQSRAQNGNV* | 249 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi18g1332 | 248 | Pfam | Sugar efflux transporter for intercellular exchange | 134 | 215 | IPR004316 | GO:0016020 | |
| Vvi18g1332 | 248 | Pfam | Sugar efflux transporter for intercellular exchange | 10 | 97 | IPR004316 | GO:0016020 | |
| Vvi18g1332 | 248 | Gene3D | - | 10 | 100 | - | - | |
| Vvi18g1332 | 248 | Gene3D | - | 130 | 217 | - | - | |
| Vvi18g1332 | 248 | PANTHER | RAG1-ACTIVATING PROTEIN 1 | 17 | 226 | IPR047664 | - | |
| Vvi18g1332 | 248 | FunFam | Bidirectional sugar transporter SWEET | 10 | 100 | - | - | |
| Vvi18g1332 | 248 | FunFam | Bidirectional sugar transporter SWEET | 129 | 222 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi18g1332 | Vvi-Chr18 | 13476577 | 13478521 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vvi18g1332 | 8 | 198 | Miscellaneous Gene Families | AT1G21460 | 79.058 | 3.62e-106 | 303 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi18g1332 | K15382 | - | vvi:100247121 | 467.618 |