Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1319 ATGGAAGAAGTGGTAATCATAGTAGGAGCTGGCCCTTCTGGTCTTGCAACTTCTGCATGCCTGAATGTTCTCTCCATCCCCAACATAATCCTGGAAAGAGAGGATTTCTTTGCCTCTTTGTGGAAGAAAAGGTCATATGATCGCTTAAAGCTTCACCTCGGAAAGCAGTTTTGCCAACTTCCCCACATGCCCTCCCCCCCAGGTACACCCACATTTATCCCCAAGGCTCGTTTTCTTCGGTACTTGGAGGACTATGTATCTCACTTCCAGATAAACCCACGATACCACCGCTTGGTAGAGTCTGCATCCTATGATAAGGTTGCAGCAAAGTGGCACATAGTGGCCAAGAACACACTCTCTGATGAGTCGGAAGTGTACCTAGGGAAGTTTCTGGTGGTCGCCACTGGTGAGAACAGTGAGGGTCTCATTCCTAAGATACCCGGGTTGGACAGTTTTGGAGGGGAGTTCATGCACTGTAGCAAGTATAAGAACGGAAAGAGATTTGCTGACAAAGAAGTTTTGGTTGTTGGATGTGGGAATTCTGGCATGGAGATAGCCTATGACTTATGGGATCGAGGTGCAAAAACCTGTATTGTTGTTCGCAGCCCGAAACATGTGGTTACAAAGGAAATGGTGTTACTTGGAATGTTTTTGTTGAAATATGTTCCTCGCAAGGTGGTGGATTATGTTATTGTGTCTTTGGCCAAATTGAACTATGGAGATCTTTCTAATTATGGGCTTCCAAGGCCAAAAGAGGGACCATTTTATCTTAAAGATGTAACTCGTTCACCTCCTATCGTTGATGTTGGAACCATAGGCAAGATTAAGGAAGGAGAAATTCAGGTTGTGCCAGCAGTTACAAAGATAGAAGGCCAATATGTCTATTTTTCTAATGGCAAAATGAATCAATTCGATGCTATAATCTTTGCTACGGGCTACAAAAGCACTGTTTTAAAATGGCTTCAGGATGATGAAAACCTTTTCAACGAGGATGGAATGCCTAAGAAGAATTTCCCGAATCACTGGAATGGGGAAAATGGTCTCTATTGTGTTGGATTTGCAAGTCGAGGGTTATTTGGAATTGCAAGAGATGCAGAACATATAGCCAATCACATCAATGGTGCTGTGCGAGGGAAATAA 1140 0.436 MEEVVIIVGAGPSGLATSACLNVLSIPNIILEREDFFASLWKKRSYDRLKLHLGKQFCQLPHMPSPPGTPTFIPKARFLRYLEDYVSHFQINPRYHRLVESASYDKVAAKWHIVAKNTLSDESEVYLGKFLVVATGENSEGLIPKIPGLDSFGGEFMHCSKYKNGKRFADKEVLVVGCGNSGMEIAYDLWDRGAKTCIVVRSPKHVVTKEMVLLGMFLLKYVPRKVVDYVIVSLAKLNYGDLSNYGLPRPKEGPFYLKDVTRSPPIVDVGTIGKIKEGEIQVVPAVTKIEGQYVYFSNGKMNQFDAIIFATGYKSTVLKWLQDDENLFNEDGMPKKNFPNHWNGENGLYCVGFASRGLFGIARDAEHIANHINGAVRGK* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1319 379 Gene3D - 2 377 IPR036188 -
Vvi18g1319 379 PIRSF FMO 1 358 IPR000960 GO:0050660|GO:0050661
Vvi18g1319 379 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 5 373 - -
Vvi18g1319 379 SUPERFAMILY FAD/NAD(P)-binding domain 170 369 IPR036188 -
Vvi18g1319 379 Pfam Flavin-binding monooxygenase-like 5 316 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vvi18g1319 379 SUPERFAMILY FAD/NAD(P)-binding domain 5 206 IPR036188 -
Vvi18g1319 379 PRINTS Flavin-containing monooxygenase (FMO) signature 110 126 IPR000960 GO:0050660|GO:0050661
Vvi18g1319 379 PRINTS Flavin-containing monooxygenase (FMO) signature 3 19 IPR000960 GO:0050660|GO:0050661
Vvi18g1319 379 PRINTS Flavin-containing monooxygenase (FMO) signature 297 324 IPR000960 GO:0050660|GO:0050661
Vvi18g1319 379 PRINTS Flavin-containing monooxygenase (FMO) signature 157 171 IPR000960 GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1319 Vvi-Chr18 13303082 13304738 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1319 K11816 - vvi:100262640 779.245