Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1313 ATGCAAATCGTGATACTCGGATGTCAGTGTGAAGTTGTGATTAAGGTGAAAGTGTTGAAATCAGAGCTTAGAAGAAGGTCATCGACTGTTAGGACTGATATAGAAAACAATGGGAACACGCATTATCCTTTCATTTTAGGCCACTCTATTGCAAATATTCACTCCCTCTTGGAGGCGGGTGCATTTTCTGGTTTCAAAGTTGAAGAGATTGATATTGAGATACTTTTCAACACACAAAAGCAGGATTTGGATGGGATGAGTTTTCCAGAATACGTCATCTACTTCAGAATAGCAATATATAGCCAGCTTTGTCAAGATGACATGCCAATGGTGAAGAGATCTGCTGCATCAAATCTGAGAAAGTTTTCTGCTACTGTTGAAGCTGCTCATTCAAAGGTTGACATCATGTCAATATTTGAGGATCTGATACAGGATGATCAAGATTCTGTTAGTGCTGAAGTCGCTTATGCAGCCATGCTGGACATTGGAAACTTGGTGCCTGCAGGCCACGACTCCACTTATTCGTGGCAGAAATTCAATCACCCAATAGACACAATATTACCCACCCAGATACTGAATCAAGGCAGCAAACTTGCAGCTCTTTTCTCGAAGGTGAATTATCCAAGTGGAAGATCCATGATTATATTGCACACTGACCAGAATCTCGTGTTTTACACCACTGATTTCTCAATAGATTCCGCAAATCCATACTTCGAATCGTATAGAACAAGAAAGTTACTTCGATGCTCCTTCAAAATCTTGTCTAAAAGAATCTTCAAGCGAACCTTTGGTCTCAGAGTTCCCATTGCAGTCAACTAA 819 0.4042 MQIVILGCQCEVVIKVKVLKSELRRRSSTVRTDIENNGNTHYPFILGHSIANIHSLLEAGAFSGFKVEEIDIEILFNTQKQDLDGMSFPEYVIYFRIAIYSQLCQDDMPMVKRSAASNLRKFSATVEAAHSKVDIMSIFEDLIQDDQDSVSAEVAYAAMLDIGNLVPAGHDSTYSWQKFNHPIDTILPTQILNQGSKLAALFSKVNYPSGRSMIILHTDQNLVFYTTDFSIDSANPYFESYRTRKLLRCSFKILSKRIFKRTFGLRVPIAVN* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1313 272 SUPERFAMILY alpha-D-mannose-specific plant lectins 151 199 IPR036426 -
Vvi18g1313 272 Gene3D - 81 188 IPR011989 -
Vvi18g1313 272 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 98 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1313 Vvi-Chr18 13256399 13259264 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1313 - - vvi:100253323 137.502