Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1308 ATGGCCTACCCACCAGGTACACCCACATTTATCCCCAAGGCTGGTTTTCCTCAGTACTTGGAGGACTATGCATCTTACTTTCAGATAAACCCACAATACCACTGCTTTATAGAGTCTGCATCCTATGATAAGGTTGCAGGAAAGTGGCACATAGTGGCTAAGAACACACTCTCTGATGAGCTAGAGGTGTACCTAGGGAAGTTTCTGGTGGTTGCCACTGGTAATAACAGTGAGGGTCTCATTCCTAAGATACCTGGGTTGGACAGTTTTGGAGGGGATTTCATGCATTGTAGCAATTATAAGAATGGAAAGAGATTCACTAACAAAGAAGTTTTGGTTGTTGAATGTGGGAATTCTGGCATGGAGATAGCTTATGACTTATGGGATCATGGTGCAATAACCTCTATTGTTGTTCGCAACCGAGTAATGTCTCTTTTTCTTCACAATTTCTATAATTTGTGA 462 0.4199 MAYPPGTPTFIPKAGFPQYLEDYASYFQINPQYHCFIESASYDKVAGKWHIVAKNTLSDELEVYLGKFLVVATGNNSEGLIPKIPGLDSFGGDFMHCSNYKNGKRFTNKEVLVVECGNSGMEIAYDLWDHGAITSIVVRNRVMSLFLHNFYNL* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1308 153 SUPERFAMILY FAD/NAD(P)-binding domain 3 142 IPR036188 -
Vvi18g1308 153 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 1 142 - -
Vvi18g1308 153 Pfam Flavin-binding monooxygenase-like 7 130 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vvi18g1308 153 Gene3D - 1 150 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1308 Vvi-Chr18 13195418 13195879 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1308 K11816 - vvi:100260746 272.707